RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 RBFOX2O43251 390 aaKnown RBP eCLIP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 SNAI2O43623 268 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 SSSCA1O60232 199 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 WDR1O75083 606 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 MPIG6BO95866 241 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 C3orf79P0CE67 100 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 NTF4P34130 210 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 SNU13P55769 128 aaKnown RBP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 PAX2Q02962 417 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 MEF2CQ06413 473 aaPredicted RBP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 CD69Q07108 199 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR5AU1Q8NGC0 362 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 FAM222BQ8WU58 562 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 RAB1CQ92928 201 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 C1orf147Q96MC9 270 aaPredicted RBP4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 CRIM1Q9NZV1 1036 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 NSG2Q9Y328 171 aa4.89□□□□□ -1.63
SOX2-OT-218ENST00000498731 C5orf63A6NC05 138 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 NKX2-6A6NCS4 301 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CEACAM18A8MTB9 384 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 J3QL48 77 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 DHHO43323 396 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR7C2O60412 319 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGHV3-9P01782 118 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CCL3P10147 92 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 AADACP22760 399 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CFPP27918 469 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 FUT6P51993 359 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CLRN1P58418 232 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 TAS2R31P59538 309 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 PAFAH1B2P68402 229 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 MEF2BQ02080 365 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 MSMO1Q15800 293 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM41BQ5BJD5 291 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 C9orf135Q5VTT2 229 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CENPVQ7Z7K6 275 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 C11orf1Q9H5F2 150 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 PLEKHF2Q9H8W4 249 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 NXT1Q9UKK6 140 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 MCTS1Q9ULC4 181 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 HELZ2Q9BYK8 2649 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 LOC107986453A0A1B0GWG9 222 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CLEC18AA5D8T8 446 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 TNFSF15O95150 251 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CRYAAP02489 173 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 P04436 131 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 TACSTD2P09758 323 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF20P17024 532 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 KITLGP21583 273 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CDAP32320 146 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 RBMXP38159 391 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 SSR4P51571 173 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 FXYD4P59646 89 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CSNK2A1P68400 391 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 SLC35B1P78383 322 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 FHL3Q13643 280 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 PCOLCEQ15113 449 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 FAM57BQ71RH2 274 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 TGIF2LYQ8IUE0 185 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CLEC18CQ8NCF0 446 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CSNK2A3Q8NEV1 391 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 OR5H2Q8NGV7 314 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 KCNG3Q8TAE7 436 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 DDIT4LQ96D03 193 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 BET1LQ9NYM9 111 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 NAV2Q8IVL1 2488 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF462Q96JM2 2506 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 H3BMH7 237 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNHIT1O43257 154 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 NUDT3O95989 172 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 MT-CO3P00414 261 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 CTLA4P16410 223 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 PIGPP57054 158 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 UBE2NP61088 152 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 RPL27P61353 136 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 ARL16Q0P5N6 197 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 TMEM267Q0VDI3 215 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 SLC17A1Q14916 467 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 TRIP6Q15654 476 aaKnown RBP4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 ZNF787Q6DD87 383 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 FBXW12Q6X9E4 464 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 LGI3Q8N145 548 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 MUC15Q8N387 334 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 SLAMF6Q96DU3 332 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 WDYHV1Q96HA8 205 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 SAMD10Q9BYL1 202 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 GNB4Q9HAV0 340 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 Q9N2K0 584 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 B3GALT5Q9Y2C3 310 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 WASHC3Q9Y3C0 194 aa4.88□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGHV1-69-2A0A0G2JMI3 117 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 K7ERU9 68 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 SLC17A3O00476 420 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 SYNGR4O95473 234 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 GYPAP02724 150 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 GPX1P07203 203 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 IGLC1P0CG04 106 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 PLGLB1Q02325 96 aa4.87□□□□□ -1.63
SOX2-OT-218ENST00000498731 MYBPHQ13203 477 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms