RNA–Protein interactions for RNA: ENST00000498268.1

USP34-222, Transcript of ubiquitin specific peptidase 34, human

TSL 3

Gene USP34, Length 497 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP34-222	ENST00000498268	TPI1	P60174	286 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	NUMA1	Q14980	2115 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	EBP	Q15125	230 aa	Known RBP	0.75	□□□□□ -2.29
USP34-222	ENST00000498268	MIA	Q16674	131 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	LRRC26	Q2I0M4	334 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	GPHB5	Q86YW7	130 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	ASB13	Q8WXK3	278 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	ANKRD36BP1	Q96IX9	119 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	ZNF514	Q96K75	400 aa	Predicted RBP	0.75	□□□□□ -2.29
USP34-222	ENST00000498268	ATP6V1G3	Q96LB4	118 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	PACRG	Q96M98	296 aa	Predicted RBP	0.75	□□□□□ -2.29
USP34-222	ENST00000498268	SPACA1	Q9HBV2	294 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	HES4	Q9HCC6	221 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	SPANXB1	Q9NS25	103 aa	Predicted RBP	0.75	□□□□□ -2.29
USP34-222	ENST00000498268	ANGPT4	Q9Y264	503 aa		0.75	□□□□□ -2.29
USP34-222	ENST00000498268	KLK5	Q9Y337	293 aa	Predicted RBP	0.75	□□□□□ -2.29
USP34-222	ENST00000498268	SOX21	Q9Y651	276 aa	Predicted RBP	0.75	□□□□□ -2.29
USP34-222	ENST00000498268	DISP1	Q96F81	1524 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	0.74	□□□□□ -2.29
USP34-222	ENST00000498268	MEIKIN	A0A087WXM9	373 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	TRAV38-1	A0A0B4J264	116 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	IGHV1-18	A0A0C4DH31	117 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	IGKV3D-7	A0A0C4DH55	119 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	IGKV3OR2-268	A0A0C4DH90	116 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	TINCR	A0A1B0GVN0	87 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	FABP12	A6NFH5	140 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	CALU	O43852	315 aa	Predicted RBP	0.74	□□□□□ -2.29
USP34-222	ENST00000498268	IGKV2D-40	P01614	121 aa	Predicted RBP	0.74	□□□□□ -2.29
USP34-222	ENST00000498268	DEFA4	P12838	97 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	PSMB8	P28062	276 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	ALDH3A1	P30838	453 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	AKR1C3	P42330	323 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	RPL28	P46779	137 aa	Known RBP	0.74	□□□□□ -2.29
USP34-222	ENST00000498268	EMP1	P54849	157 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	AQP4	P55087	323 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	KRTAP10-4	P60372	401 aa	Predicted RBP	0.74	□□□□□ -2.29
USP34-222	ENST00000498268	RPS24	P62847	133 aa	Known RBP	0.74	□□□□□ -2.29
USP34-222	ENST00000498268	RPL30	P62888	115 aa	Known RBP	0.74	□□□□□ -2.29
USP34-222	ENST00000498268	AKR1C1	Q04828	323 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	NNAT	Q16517	81 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	PLPPR5	Q32ZL2	321 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	OR7G1	Q8NGA0	311 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	WDR54	Q9H977	334 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	HRASLS	Q9HDD0	168 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	NAT8	Q9UHE5	227 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	RBM7	Q9Y580	266 aa	Known RBP	0.74	□□□□□ -2.29
USP34-222	ENST00000498268	WDR90	Q96KV7	1748 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	FREM1	Q5H8C1	2179 aa		0.74	□□□□□ -2.29
USP34-222	ENST00000498268	NUP160	Q12769	1436 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	TRAV7	A0A075B6U4	112 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268		A0A0J9YW62	118 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268		H7C2G1	150 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	BIRC5	O15392	142 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	ORC5	O43913	435 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	PPBP	P02775	128 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	SERPINA7	P05543	415 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	LGALS1	P09382	135 aa	Known RBP	0.73	□□□□□ -2.29
USP34-222	ENST00000498268	HIST1H1C	P16403	213 aa	Known RBP	0.73	□□□□□ -2.29
USP34-222	ENST00000498268	UBE2G2	P60604	165 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	CXCR4	P61073	352 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	SKP1	P63208	163 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	EMX1	Q04741	257 aa	Predicted RBP	0.73	□□□□□ -2.29
USP34-222	ENST00000498268	TMED1	Q13445	227 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	PPP1R1A	Q13522	171 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	C9orf64	Q5T6V5	341 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	C7orf65	Q6ZTY9	151 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	HIST2H3A	Q71DI3	136 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	FP248	Q71RG6	208 aa	Predicted RBP	0.73	□□□□□ -2.29
USP34-222	ENST00000498268	UBL4B	Q8N7F7	174 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	OR2T27	Q8NH04	317 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	SMIM19	Q96E16	107 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	GNPNAT1	Q96EK6	184 aa	Predicted RBP	0.73	□□□□□ -2.29
USP34-222	ENST00000498268	CCL13	Q99616	98 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	DHRS9	Q9BPW9	319 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	UPF3B	Q9BZI7	483 aa	Known RBP	0.73	□□□□□ -2.29
USP34-222	ENST00000498268	CXorf21	Q9HAI6	301 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	PCDH15	Q96QU1	1955 aa		0.73	□□□□□ -2.29
USP34-222	ENST00000498268	DICER1	Q9UPY3	1922 aa	Known RBP	0.73	□□□□□ -2.29
USP34-222	ENST00000498268	MYH11	P35749	1972 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	NAV1	Q8NEY1	1877 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268		A0A0D9SEW6	157 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268		F8W036	122 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	COX7A2L	O14548	114 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	CIAO1	O76071	339 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	APOM	O95445	188 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	TFPT	P0C1Z6	253 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	MSN	P26038	577 aa	Known RBP	0.72	□□□□□ -2.29
USP34-222	ENST00000498268	PSMB6	P28072	239 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	CD40LG	P29965	261 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	G6PC	P35575	357 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	HAAO	P46952	286 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	CDC34	P49427	236 aa	Predicted RBP	0.72	□□□□□ -2.29
USP34-222	ENST00000498268	RAB14	P61106	215 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	FKBP1A	P62942	108 aa	Known RBP	0.72	□□□□□ -2.29
USP34-222	ENST00000498268	LRRC75B	Q2VPJ9	315 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	SBSN	Q6UWP8	590 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	0.72	□□□□□ -2.29
USP34-222	ENST00000498268	SLC51B	Q86UW2	128 aa		0.72	□□□□□ -2.29
USP34-222	ENST00000498268	RPS19BP1	Q86WX3	136 aa	Known RBP	0.72	□□□□□ -2.29
USP34-222	ENST00000498268	TBC1D19	Q8N5T2	526 aa		0.72	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms