RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 MED9Q9NWA0 146 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 THSD7AQ9UPZ6 1657 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 SLX4Q8IY92 1834 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 RTTNQ86VV8 2226 aa0.52□□□□□ -2.33
SMC4-227ENST00000497984 A0A0J9YW62 118 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 TEX50A0A1B0GTY4 177 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 TINCRA0A1B0GVN0 87 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 C5orf49A4QMS7 147 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 HSBP1L1C9JCN9 74 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 H3BT86 120 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 H7C2G1 150 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 CCL5P13501 91 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 ALDH3A1P30838 453 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 RPL28P46779 137 aaKnown RBP0.51□□□□□ -2.33
SMC4-227ENST00000497984 FXYD7P58549 80 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 TAS2R20P59543 309 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 FKBP1AP62942 108 aaKnown RBP0.51□□□□□ -2.33
SMC4-227ENST00000497984 EBPQ15125 230 aaKnown RBP0.51□□□□□ -2.33
SMC4-227ENST00000497984 Q1T7F1 81 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 DNM1P34Q6PK57 102 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 ZNF705AQ6ZN79 300 aaPredicted RBP0.51□□□□□ -2.33
SMC4-227ENST00000497984 RASSF6Q6ZTQ3 369 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 FAM19A5Q7Z5A7 132 aaPredicted RBP0.51□□□□□ -2.33
SMC4-227ENST00000497984 SPATA24Q86W54 205 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 C9orf163Q8N9P6 203 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 ASB13Q8WXK3 278 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 BBS2Q9BXC9 721 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 CST9LQ9H4G1 147 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 ZNHIT6Q9NWK9 470 aaKnown RBP0.51□□□□□ -2.33
SMC4-227ENST00000497984 EURLQ9NYK6 297 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 TIMM9Q9Y5J7 89 aa0.51□□□□□ -2.33
SMC4-227ENST00000497984 TRAPPC2LH3BP13 241 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 STX10O60499 249 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 APOMO95445 188 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 TFPTP0C1Z6 253 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 PET100P0DJ07 73 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 CCR7P32248 378 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 CD79BP40259 229 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 RAB14P61106 215 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 CDK5R1Q15078 307 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 LRRC75BQ2VPJ9 315 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 PLPPR5Q32ZL2 321 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 ARHGAP11BQ3KRB8 267 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 ACSM3Q53FZ2 586 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 FAM173BQ6P4H8 233 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 NAA40Q86UY6 237 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 CD302Q8IX05 232 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 Q8N2B8 174 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 MBD3L1Q8WWY6 194 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 TMA16Q96EY4 203 aaKnown RBP0.5□□□□□ -2.33
SMC4-227ENST00000497984 CCL13Q99616 98 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 ADAT1Q9BUB4 502 aaKnown RBP0.5□□□□□ -2.33
SMC4-227ENST00000497984 DSCAML1Q8TD84 2053 aa0.5□□□□□ -2.33
SMC4-227ENST00000497984 ZFHX2Q9C0A1 2572 aaPredicted RBP0.5□□□□□ -2.33
SMC4-227ENST00000497984 SCAF11Q99590 1463 aaKnown RBP0.49□□□□□ -2.33
SMC4-227ENST00000497984 FLT4P35916 1363 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 SYNRGQ9UMZ2 1314 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 TRAV38-1A0A0B4J264 116 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 TMEM269A0A1B0GVZ9 245 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 COX7A2LO14548 114 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 ATP8B1O43520 1251 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 CREBL2O60519 120 aaPredicted RBP0.49□□□□□ -2.33
SMC4-227ENST00000497984 PPBPP02775 128 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 RPSAP08865 295 aaKnown RBP0.49□□□□□ -2.33
SMC4-227ENST00000497984 PSMB8P28062 276 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 SLCO1A2P46721 670 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 EMP1P54849 157 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 CXCR4P61073 352 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 EMX1Q04741 257 aaPredicted RBP0.49□□□□□ -2.33
SMC4-227ENST00000497984 SURF2Q15527 256 aaPredicted RBP0.49□□□□□ -2.33
SMC4-227ENST00000497984 SGMS2Q8NHU3 365 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 EEF1AKMT1Q8WVE0 214 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 GNPNAT1Q96EK6 184 aaPredicted RBP0.49□□□□□ -2.33
SMC4-227ENST00000497984 ANKRD36BP1Q96IX9 119 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 DERL2Q9GZP9 239 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 WDR54Q9H977 334 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 HRASLSQ9HDD0 168 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 CD300AQ9UGN4 299 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 COQ4Q9Y3A0 265 aa0.49□□□□□ -2.33
SMC4-227ENST00000497984 NUP160Q12769 1436 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 WDR90Q96KV7 1748 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 TRAPPC13A5PLN9 417 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 FABP12A6NFH5 140 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 OR51F1A6NGY5 319 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 GOLGA6L10A6NI86 522 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 IBA57-AS1B1ANH7 110 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 BIRC5O15392 142 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 ORC5O43913 435 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 HPGDSO60760 199 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 NSA2O95478 260 aaKnown RBP0.48□□□□□ -2.33
SMC4-227ENST00000497984 HLA-DRAP01903 254 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 HIST1H1CP16403 213 aaKnown RBP0.48□□□□□ -2.33
SMC4-227ENST00000497984 AP1S1P61966 158 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 RPL30P62888 115 aaKnown RBP0.48□□□□□ -2.33
SMC4-227ENST00000497984 DEFB115Q30KQ5 88 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 FAM27BQ5VT28 67 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 SDHAF4Q5VUM1 108 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 SBSNQ6UWP8 590 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 FUNDC1Q8IVP5 155 aa0.48□□□□□ -2.33
SMC4-227ENST00000497984 DYNAPQ8N1N2 210 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms