RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PSMD8P48556 350 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 AP1S1P61966 158 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 AKR1C1Q04828 323 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 LPCAT4Q643R3 524 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 GPHB5Q86YW7 130 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 OR2T27Q8NH04 317 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 PTH2Q96A98 100 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 OPTNQ96CV9 577 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 OR52B2Q96RD2 323 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 NMNAT3Q96T66 252 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 SPZ1Q9BXG8 430 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 HRASLSQ9HDD0 168 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 AK3Q9UIJ7 227 aa1.67□□□□□ -2.14
SMC4-225ENST00000497203 COL4A2P08572 1712 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 IGHV1-69-2A0A0G2JMI3 117 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 SMIM23A6NLE4 172 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 J3QKU1 62 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 REG1AP05451 166 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 UBE2IP63279 158 aaKnown RBP1.66□□□□□ -2.14
SMC4-225ENST00000497203 DEFB103AP81534 67 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 EMX1Q04741 257 aaPredicted RBP1.66□□□□□ -2.14
SMC4-225ENST00000497203 COQ5Q5HYK3 327 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 C1orf194Q5T5A4 169 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 OR10K2Q6IF99 312 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 ZNF550Q7Z398 422 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 SLC35E3Q7Z769 313 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 OR4X2Q8NGF9 303 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 RNASE6Q93091 150 aaKnown RBP1.66□□□□□ -2.14
SMC4-225ENST00000497203 KLF6Q99612 283 aaPredicted RBP1.66□□□□□ -2.14
SMC4-225ENST00000497203 GPR84Q9NQS5 396 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 NUP160Q12769 1436 aa1.66□□□□□ -2.14
SMC4-225ENST00000497203 IGLV3-9A0A075B6K5 115 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 TRAV41A0A0B4J266 112 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 A0A1B0GV50 99 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 MDFIC2A0A1B0GVS7 189 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 OR4C45A6NMZ5 311 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 OVOL1O14753 267 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 IGKV1-16P04430 117 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 CALB1P05937 261 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 CCR7P32248 378 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 MARCKSL1P49006 195 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 NAA20P61599 178 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 FABP9Q0Z7S8 132 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 MIAQ16674 131 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 LRRC75BQ2VPJ9 315 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 SAPCD1Q5SSQ6 148 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 GID4Q8IVV7 300 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 SLC22A24Q8N4F4 322 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 MNS1Q8NEH6 495 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 GPR32P1Q8NGA4 272 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 RNASE11Q8TAA1 199 aaKnown RBP1.65□□□□□ -2.15
SMC4-225ENST00000497203 ZNF675Q8TD23 568 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 DCANP1Q8TF63 244 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 DIRAS2Q96HU8 199 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 FAM96AQ9H5X1 160 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 PRO2289Q9P1D8 64 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 ANAPC10Q9UM13 185 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 HHLA3Q9XRX5 114 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 LSM5Q9Y4Y9 91 aaKnown RBP1.65□□□□□ -2.15
SMC4-225ENST00000497203 PXMP4Q9Y6I8 212 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 KDM5BQ9UGL1 1544 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 EVC2Q86UK5 1308 aa1.65□□□□□ -2.15
SMC4-225ENST00000497203 STRCP1A6NGW2 1772 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 ABCC12Q96J65 1359 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 MDC1Q14676 2089 aaKnown RBP1.64□□□□□ -2.15
SMC4-225ENST00000497203 A0A0G2JQZ4 141 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 ARRDC5A6NEK1 342 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 M0R036 132 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 KCNK1O00180 336 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 TGOLN2O43493 480 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 BPGMP07738 259 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 ALDH3A1P30838 453 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 EMP1P54849 157 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 POLR2GP62487 172 aaKnown RBP eCLIP1.64□□□□□ -2.15
SMC4-225ENST00000497203 ERHP84090 104 aaKnown RBP1.64□□□□□ -2.15
SMC4-225ENST00000497203 CAV1Q03135 178 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 RELAQ04206 551 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 PRDX4Q13162 271 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 CCDC122Q5T0U0 273 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 Q6ZTI0 123 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 UMODL1-AS1Q8N2C9 162 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 ASB17Q8WXJ9 295 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 CXorf21Q9HAI6 301 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 XAGE1AQ9HD64 81 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 PRELID1Q9Y255 219 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 ADGRB3O60242 1522 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 RTEL1-TNFRSF6BF6WH68 1400 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 FBN1P35555 2871 aaKnown RBP1.64□□□□□ -2.15
SMC4-225ENST00000497203 NCKAP5O14513 1909 aa1.64□□□□□ -2.15
SMC4-225ENST00000497203 SIPA1L1O43166 1804 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 KIAA2026Q5HYC2 2103 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 IGHV3-64A0A075B6Q5 118 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 J3QQQ9 107 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 KLRC4O43908 158 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 IFNA5P01569 189 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 FAM228BP0C875 321 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 CCL1P22362 96 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 PSMB8P28062 276 aa1.63□□□□□ -2.15
SMC4-225ENST00000497203 CA5AP35218 305 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms