RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 RAB39BQ96DA2 213 aa13.48□□□□□ -0.25
ATG4B-225ENST00000494465 MRPL20Q9BYC9 149 aaKnown RBP13.48□□□□□ -0.25
ATG4B-225ENST00000494465 F2RL1P55085 397 aa13.47□□□□□ -0.25
ATG4B-225ENST00000494465 HBG1P69891 147 aa13.47□□□□□ -0.25
ATG4B-225ENST00000494465 HBG2P69892 147 aa13.47□□□□□ -0.25
ATG4B-225ENST00000494465 OR4A47Q6IF82 309 aa13.47□□□□□ -0.25
ATG4B-225ENST00000494465 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
ATG4B-225ENST00000494465 OR4A16Q8NH70 328 aa13.47□□□□□ -0.25
ATG4B-225ENST00000494465 CIB3Q96Q77 187 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-225ENST00000494465 CACNA1BQ00975 2339 aa13.47□□□□□ -0.25
ATG4B-225ENST00000494465 CEBPZOSA8MTT3 80 aa13.47□□□□□ -0.25
ATG4B-225ENST00000494465 PPIHO43447 177 aaKnown RBP13.47□□□□□ -0.25
ATG4B-225ENST00000494465 IL6RP08887 468 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-225ENST00000494465 GNPNAT1Q96EK6 184 aaPredicted RBP13.47□□□□□ -0.25
ATG4B-225ENST00000494465 SLC35D1Q9NTN3 355 aa13.47□□□□□ -0.25
ATG4B-225ENST00000494465 SRRM4A7MD48 611 aaKnown RBP13.46□□□□□ -0.25
ATG4B-225ENST00000494465 GPR37O15354 613 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 ZNF137PP52743 207 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 SPCS3P61009 180 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 DIAPH2-AS1Q14236 149 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 WDR25Q64LD2 544 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-225ENST00000494465 ZNF429Q86V71 674 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 C8orf46Q8TAG6 207 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 STRAPQ9Y3F4 350 aaKnown RBP13.46□□□□□ -0.25
ATG4B-225ENST00000494465 C15orf61A6NNL5 157 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 TRIM77I1YAP6 450 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 ARG1P05089 322 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 AKR1C1Q04828 323 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 SLC38A11Q08AI6 406 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 DHRS7BQ6IAN0 325 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-225ENST00000494465 FAM71F2Q6NXP2 309 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 OR5AN1Q8NGI8 311 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 OR13D1Q8NGV5 346 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 OR9G1Q8NH87 305 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 TMEM133Q9H2Q1 129 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 MIOXQ9UGB7 285 aa13.46□□□□□ -0.25
ATG4B-225ENST00000494465 C15orf62A8K5M9 175 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 H0YJW9 148 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 IFNA5P01569 189 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 IFNA17P01571 189 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 CAMLGP49069 296 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 RTL8BQ17RB0 113 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 OR8G2PQ6IF36 304 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 ABHD12Q8N2K0 398 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 OR8B3Q8NGG8 313 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 OR10X1Q8NGY0 326 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 RAB1CQ92928 201 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 NEIL1Q96FI4 390 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-225ENST00000494465 OR8B2Q96RD0 313 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 TMEM14BQ9NUH8 114 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 TNCP24821 2201 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 UMAD1C9J7I0 102 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 HRASP01112 189 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 PRH1P02810 166 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 VDAC2P45880 294 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-225ENST00000494465 REG1BP48304 166 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 DLX1P56177 255 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 LRRC75BQ2VPJ9 315 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 THNSL2Q86YJ6 484 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 LILRB2Q8N423 598 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 TMEM186Q96B77 213 aa13.45□□□□□ -0.26
ATG4B-225ENST00000494465 PARD6GQ9BYG4 376 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-225ENST00000494465 FOXA2Q9Y261 457 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-225ENST00000494465 SCO1O75880 301 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 CDKN1AP38936 164 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 ZNF616Q08AN1 781 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 LY6G5BQ8NDX9 201 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 NABP2Q9BQ15 211 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 RSG1Q9BU20 258 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 CHODLQ9H9P2 273 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 UBTD1Q9HAC8 227 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 PPIAL4CA0A0B4J2A2 164 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 PPIAL4GP0DN37 164 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 FAM213BQ8TBF2 198 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 TIMD4Q96H15 378 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 NARFLQ9H6Q4 476 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 NUP50Q9UKX7 468 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 TCF19Q9Y242 345 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 ARHGAP32A7KAX9 2087 aa13.44□□□□□ -0.26
ATG4B-225ENST00000494465 TACC2O95359 2948 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 TMEM218A2RU14 115 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 A6NNC1 897 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 AGPAT2O15120 278 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 NDUFS7O75251 213 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 OR8U8P0C7N1 319 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 RPS16P62249 146 aaKnown RBP13.43□□□□□ -0.26
ATG4B-225ENST00000494465 SCRT1Q9BWW7 348 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 WDR61Q9GZS3 305 aaKnown RBP13.43□□□□□ -0.26
ATG4B-225ENST00000494465 TMEM231Q9H6L2 316 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 FAM96BQ9Y3D0 163 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 C22orf46C9J442 243 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 F12P00748 615 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-225ENST00000494465 RBP4P02753 201 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 GNB2P62879 340 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 TAGLNQ01995 201 aaKnown RBP13.43□□□□□ -0.26
ATG4B-225ENST00000494465 FBXO7Q9Y3I1 522 aa13.43□□□□□ -0.26
ATG4B-225ENST00000494465 IGHV2-26A0A0B4J1V2 119 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 UBE2L5PA0A1B0GUS4 154 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 IGLV1-47P01700 117 aa13.42□□□□□ -0.26
ATG4B-225ENST00000494465 MYOD1P15172 320 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms