RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 POLR3KQ9Y2Y1 108 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-234ENST00000493923 LHFPL6Q9Y693 200 aa6.79□□□□□ -1.32
HDAC6-234ENST00000493923 WNK1Q9H4A3 2382 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 TRAV30A0A087WSZ9 112 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 IGLV1-36A0A0B4J1U3 117 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 TRAV1-1A0A0B4J248 108 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF727A8MUV8 499 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 TMEM238C9JI98 176 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 F6UZH7 168 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 K7ERU9 68 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 TIMM8AO60220 97 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-234ENST00000493923 CA11O75493 328 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 TXNDC12O95881 172 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 TYMSP04818 313 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 SERPINA2P20848 420 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 KITLGP21583 273 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 EFNB2P52799 333 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 TAS2R46P59540 309 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 NANOS3P60323 173 aaKnown RBP6.78□□□□□ -1.32
HDAC6-234ENST00000493923 TNFAIP6P98066 277 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-234ENST00000493923 IL24Q13007 206 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 EIF2B1Q14232 305 aaKnown RBP6.78□□□□□ -1.32
HDAC6-234ENST00000493923 ARL6IP1Q15041 203 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF260Q3ZCT1 412 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 MORN2Q502X0 79 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 KLF17Q5JT82 389 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-234ENST00000493923 C1orf100Q5SVJ3 147 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 FAM201AQ5SY85 155 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 AADACL3Q5VUY0 350 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 ZNF343Q6P1L6 599 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 CFAP161Q6P656 301 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 KCNIP4Q6PIL6 250 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 CATSPERDQ86XM0 798 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 BCL6BQ8N143 479 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-234ENST00000493923 DEFB108BQ8NET1 73 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 OR2Z1Q8NG97 314 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 OR51L1Q8NGJ5 315 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 FAM213BQ8TBF2 198 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 ZNRF4Q8WWF5 429 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 NUDT11Q96G61 164 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 GPX7Q96SL4 187 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-234ENST00000493923 VAMP8Q9BV40 100 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 MAGT1Q9H0U3 335 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 CSTL1Q9H114 145 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 WDR76Q9H967 626 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 SLC7A11Q9UPY5 501 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 DHDHQ9UQ10 334 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 VWFP04275 2813 aa6.78□□□□□ -1.32
HDAC6-234ENST00000493923 TRAV8-7A0A075B6U6 113 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 MAP1LC3B2A6NCE7 125 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 MLNRO43193 412 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 BPNT1O95861 308 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 TPPP2P59282 170 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 HILS1P60008 231 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 PCBD1P61457 104 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 RAB11AP62491 216 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 COL10A1Q03692 680 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 ICAM4Q14773 271 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 IAH1Q2TAA2 248 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-234ENST00000493923 C16orf54Q6UWD8 224 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 ZNF66Q6ZN08 573 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 COMMD2Q86X83 199 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 LINC00346Q8IVM7 164 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 FAM219AQ8IW50 185 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 KLHDC1Q8N7A1 406 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 ADAD2Q8NCV1 583 aaKnown RBP6.77□□□□□ -1.33
HDAC6-234ENST00000493923 OR4C5Q8NGB2 326 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 OR13C9Q8NGT0 318 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 OR1F12Q8NHA8 337 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 MARCH1Q8TCQ1 289 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 RAB1CQ92928 201 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 ANAPC16Q96DE5 110 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 ABHD14BQ96IU4 210 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 C1orf147Q96MC9 270 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-234ENST00000493923 ZNF48Q96MX3 618 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-234ENST00000493923 MS4A10Q96PG2 267 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 TBX15Q96SF7 602 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 AGMATQ9BSE5 352 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 PARD6GQ9BYG4 376 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-234ENST00000493923 MAP1LC3BQ9GZQ8 125 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 C7orf69Q9H7B7 122 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 ELOVL3Q9HB03 270 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 SRA1Q9HD15 236 aaKnown RBP6.77□□□□□ -1.33
HDAC6-234ENST00000493923 GPR84Q9NQS5 396 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 TMEM106BQ9NUM4 274 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 PLEK2Q9NYT0 353 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 FRRS1LQ9P0K9 344 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 UQCR10Q9UDW1 63 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 RNF150Q9ULK6 438 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 RPH3ALQ9UNE2 315 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 B9D1Q9UPM9 204 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 URGCP-MRPS24S4R325 110 aa6.77□□□□□ -1.33
HDAC6-234ENST00000493923 NOTCH1P46531 2555 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 IGHV3OR16-10A0A075B7F0 116 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 LOC102723971A0A1B0GUV8 181 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 CBY3A6NI87 242 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 TOX4O94842 621 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 CSN2P05814 226 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
HDAC6-234ENST00000493923 HIST1H1CP16403 213 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms