RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 WASHC3Q9Y3C0 194 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 ICOSQ9Y6W8 199 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 MAP2P11137 1827 aaKnown RBP2.85□□□□□ -1.95
VPS13A-212ENST00000493341 NUP205Q92621 2012 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 KIF24Q5T7B8 1368 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 KTN1Q86UP2 1357 aaKnown RBP2.85□□□□□ -1.95
VPS13A-212ENST00000493341 ANKRD36BQ8N2N9 1353 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 LY75O60449 1722 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 BTAF1O14981 1849 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 M0R381 172 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 OPN1SWP03999 348 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 HLA-DQB2P05538 268 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 CDK2P24941 298 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 TMEM33P57088 247 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 APOFQ13790 326 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 TMEM86BQ8N661 226 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 STARD4Q96DR4 205 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 B9D2Q9BPU9 175 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 OR2D2Q9H210 308 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 ATPIF1Q9UII2 106 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 PAPPAQ13219 1627 aa2.85□□□□□ -1.95
VPS13A-212ENST00000493341 RTL1A6NKG5 1358 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 TUBGCP6Q96RT7 1819 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 TMED7-TICAM2A0A0A6YYA0 188 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 A0A0B4J2C4 111 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 ZNF324O75467 553 aaPredicted RBP2.84□□□□□ -1.95
VPS13A-212ENST00000493341 CD79AP11912 226 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 G0S2P27469 103 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 CD34P28906 385 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 CRABP2P29373 138 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 OR10J1P30954 320 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 MARCKSL1P49006 195 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 GDI2P50395 445 aaKnown RBP2.84□□□□□ -1.95
VPS13A-212ENST00000493341 SERPINB9P50453 376 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 KRTAP10-12P60413 245 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 C1orf194Q5T5A4 169 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 HACD4Q5VWC8 232 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 ZNF550Q7Z398 422 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 BAP18Q8IXM2 172 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 OR6V1Q8N148 313 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 APCDD1LQ8NCL9 501 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 YIPF5Q969M3 257 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 TLNRD1Q9H1K6 362 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 STOML2Q9UJZ1 356 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 TRAPPC1Q9Y5R8 145 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 S4R3C0 116 aa2.84□□□□□ -1.95
VPS13A-212ENST00000493341 ZNF831Q5JPB2 1677 aa2.84□□□□□ -1.96
VPS13A-212ENST00000493341 OVOS2A0A0G2JMS6 1433 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 IGLV3-12A0A075B6K2 115 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 LINC00862A6NCI5 91 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 ZNF98A6NK75 572 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 PRPS1L1P21108 318 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 CA7P43166 264 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 DAPP51397 102 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 SBSNQ6UWP8 590 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 OR2T27Q8NH04 317 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 SLC25A44Q96H78 314 aaPredicted RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 PYURFQ96I23 114 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 ZNF285Q96NJ3 590 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 SEC22CQ9BRL7 303 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 FBXO5Q9UKT4 447 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 MRPS16Q9Y3D3 137 aaKnown RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 FIS1Q9Y3D6 152 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 ITGB4P16144 1822 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 VIRMAQ69YN4 1812 aaKnown RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 TAF1LQ8IZX4 1826 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 MYO10Q9HD67 2058 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 EP400Q96L91 3159 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 TICRRQ7Z2Z1 1910 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 CICQ96RK0 1608 aaPredicted RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 DOT1LQ8TEK3 1739 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 SMG6Q86US8 1419 aaKnown RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 IGHV3OR15-7A0A075B7D8 119 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 DISC1C4P0D8 188 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 EEF1E1-BLOC1S5C9J1V9 151 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 K7EM74 188 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 FAM228BP0C875 321 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 PMAIP1Q13794 54 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 GUK1Q16774 197 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 ZNF615Q8N8J6 731 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 OR2T4Q8NH00 348 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 KLF14Q8TD94 323 aaPredicted RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 SELENOSQ9BQE4 189 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 RPUSD1Q9UJJ7 312 aaKnown RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 PKIGQ9Y2B9 76 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 CARHSP1Q9Y2V2 147 aaKnown RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 PRELID3BQ9Y3B1 194 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 SAMHD1Q9Y3Z3 626 aaKnown RBP2.83□□□□□ -1.96
VPS13A-212ENST00000493341 PXMP4Q9Y6I8 212 aa2.83□□□□□ -1.96
VPS13A-212ENST00000493341 TRIP11Q15643 1979 aa2.82□□□□□ -1.96
VPS13A-212ENST00000493341 IGKV1OR2-108A0A075B7D4 117 aa2.82□□□□□ -1.96
VPS13A-212ENST00000493341 A8MUU9 505 aa2.82□□□□□ -1.96
VPS13A-212ENST00000493341 C16orf90A8MZG2 172 aa2.82□□□□□ -1.96
VPS13A-212ENST00000493341 H3BMM0 161 aa2.82□□□□□ -1.96
VPS13A-212ENST00000493341 IGLV3-27P01718 113 aa2.82□□□□□ -1.96
VPS13A-212ENST00000493341 GNG10P50151 68 aa2.82□□□□□ -1.96
VPS13A-212ENST00000493341 RBX1P62877 108 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms