RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 UBE2MP61081 183 aaKnown RBP10.9□□□□□ -0.66
CDK9-204ENST00000491521 CBX3Q13185 183 aa10.9□□□□□ -0.66
CDK9-204ENST00000491521 PPP1R1AQ13522 171 aa10.9□□□□□ -0.66
CDK9-204ENST00000491521 EIF4EBP1Q13541 118 aaPredicted RBP10.9□□□□□ -0.66
CDK9-204ENST00000491521 LIAT1Q6ZQX7 453 aa10.9□□□□□ -0.66
CDK9-204ENST00000491521 SPAG16Q8N0X2 631 aa10.9□□□□□ -0.66
CDK9-204ENST00000491521 OR8H3Q8N146 312 aa10.9□□□□□ -0.66
CDK9-204ENST00000491521 ZNF383Q8NA42 475 aa10.9□□□□□ -0.66
CDK9-204ENST00000491521 SEC22CQ9BRL7 303 aa10.9□□□□□ -0.66
CDK9-204ENST00000491521 SLC35D1Q9NTN3 355 aa10.9□□□□□ -0.66
CDK9-204ENST00000491521 LIN7CQ9NUP9 197 aaKnown RBP10.9□□□□□ -0.66
CDK9-204ENST00000491521 C9orf170A2RU37 121 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 A6NDX4 124 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 VGLL3A8MV65 326 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 PRAF2O60831 178 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 SFT2D2O95562 160 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 HLA-AP01891 365 aaKnown RBP10.89□□□□□ -0.67
CDK9-204ENST00000491521 IL5P05113 134 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 SERPINE2P07093 398 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 OR5AC1P0C628 307 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 CD24P25063 80 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 BRS3P32247 399 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 MC5RP33032 325 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 KIR2DS2P43631 304 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 TAGLNQ01995 201 aaKnown RBP10.89□□□□□ -0.67
CDK9-204ENST00000491521 DHODHQ02127 395 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 RTL8BQ17RB0 113 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 NSUN5P1Q3KNT7 163 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 LYG2Q86SG7 212 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 UXS1Q8NBZ7 420 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 OR52B4Q8NGK2 314 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 TP53RKQ96S44 253 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 RANBP3Q9H6Z4 567 aaPredicted RBP10.89□□□□□ -0.67
CDK9-204ENST00000491521 ZNF702PQ9H963 129 aa10.89□□□□□ -0.67
CDK9-204ENST00000491521 A0A1W2PPI3 338 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 H0Y980 276 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 B3GALNT1O75752 331 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 RRASP10301 218 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 LPAR6P43657 344 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 MECP2P51608 486 aaKnown RBP10.88□□□□□ -0.67
CDK9-204ENST00000491521 SUPT4H1P63272 117 aaKnown RBP10.88□□□□□ -0.67
CDK9-204ENST00000491521 DHRS2Q13268 280 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 HES1Q14469 280 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 PDLIM3Q53GG5 364 aaPredicted RBP10.88□□□□□ -0.67
CDK9-204ENST00000491521 TCTEX1D1Q8N7M0 179 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 CD300LFQ8TDQ1 290 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 PRR13Q9NZ81 148 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 PITPNC1Q9UKF7 332 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 WASHC3Q9Y3C0 194 aa10.88□□□□□ -0.67
CDK9-204ENST00000491521 PRKDCP78527 4128 aaKnown RBP10.88□□□□□ -0.67
CDK9-204ENST00000491521 H0YJW9 148 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 CREBL2O60519 120 aaPredicted RBP10.87□□□□□ -0.67
CDK9-204ENST00000491521 CRYZL1O95825 349 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 TATDN3Q17R31 274 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 TMEM95Q3KNT9 176 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 LIN54Q6MZP7 749 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 ZNF695Q8IW36 515 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 OR5AN1Q8NGI8 311 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 OR4S2Q8NH73 311 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 COQ8AQ8NI60 647 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 ZNF431Q8TF32 576 aaPredicted RBP10.87□□□□□ -0.67
CDK9-204ENST00000491521 DDB2Q92466 427 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 FLYWCH2Q96CP2 140 aaKnown RBP10.87□□□□□ -0.67
CDK9-204ENST00000491521 RBMXL1Q96E39 390 aaKnown RBP10.87□□□□□ -0.67
CDK9-204ENST00000491521 GALNT14Q96FL9 552 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 PRSS22Q9GZN4 317 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 TMEM222Q9H0R3 208 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 ALG5Q9Y673 324 aa10.87□□□□□ -0.67
CDK9-204ENST00000491521 SSNA1O43805 119 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 RAMP3O60896 148 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 FBXO24O75426 580 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 DUS4LO95620 317 aaKnown RBP10.86□□□□□ -0.67
CDK9-204ENST00000491521 SNRNP70P08621 437 aaKnown RBP10.86□□□□□ -0.67
CDK9-204ENST00000491521 FAM106CPP0CH98 169 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 CD28P10747 220 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 CD1BP29016 333 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 BRWD1-AS2P59051 145 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 RPS16P62249 146 aaKnown RBP10.86□□□□□ -0.67
CDK9-204ENST00000491521 BLCAPP62952 87 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 HNF4GQ14541 408 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 TMEM187Q14656 261 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 ZNF585BQ52M93 769 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 TMEM268Q5VZI3 342 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 Q6ZS46 218 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 PDPNQ86YL7 162 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 LGI3Q8N145 548 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 C12orf45Q8N5I9 185 aaPredicted RBP10.86□□□□□ -0.67
CDK9-204ENST00000491521 GLYATL2Q8WU03 294 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 CFHR4Q92496 578 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 PHB2Q99623 299 aa10.86□□□□□ -0.67
CDK9-204ENST00000491521 SNRPGP15A8MWD9 76 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 SHOXO15266 292 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 HPRT1P00492 218 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 IGKV1D-33P01593 117 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 IGKV1-33P01594 117 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 RPA2P15927 270 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 UCP1P25874 307 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 VDAC2P45880 294 aaPredicted RBP10.85□□□□□ -0.67
CDK9-204ENST00000491521 SRPXP78539 464 aa10.85□□□□□ -0.67
CDK9-204ENST00000491521 ANKRD55Q3KP44 614 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms