RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 SLC35E3Q7Z769 313 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 CD302Q8IX05 232 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 LRRC34Q8IZ02 419 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 OR5B17Q8NGF7 314 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 C10orf105Q8TEF2 133 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 SMCR5Q8TEV8 140 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 TESCQ96BS2 214 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 SFRP2Q96HF1 295 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 KCTD7Q96MP8 289 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 MAP1LC3AQ9H492 121 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 WDR54Q9H977 334 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 CXorf21Q9HAI6 301 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 PLEKHJ1Q9NW61 149 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 NKIRAS1Q9NYS0 192 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 TAAR3PQ9P1P4 343 aa0.85□□□□□ -2.27
PTPN4-212ENST00000488896 TEX50A0A1B0GTY4 177 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 M0R381 172 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 ITGB1BP1O14713 200 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 BIRC5O15392 142 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 NDUFB2O95178 105 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 C1QCP02747 245 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 IL6P05231 212 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 IL3P08700 152 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 HIST1H1CP16403 213 aaKnown RBP0.84□□□□□ -2.27
PTPN4-212ENST00000488896 MAGEA12P43365 314 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 REG1BP48304 166 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 CTBP2P56545 445 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 RBM11P57052 281 aaKnown RBP0.84□□□□□ -2.27
PTPN4-212ENST00000488896 HLA-DRB3P79483 266 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 RELAQ04206 551 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 LRRC26Q2I0M4 334 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 HIST2H3PS2Q5TEC6 136 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 OTUD6BQ8N6M0 293 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 OR51D1Q8NGF3 324 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 SLC37A2Q8TED4 501 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 RAB2BQ8WUD1 216 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 ERMAPQ96PL5 475 aaPredicted RBP0.84□□□□□ -2.27
PTPN4-212ENST00000488896 NMNAT3Q96T66 252 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 DHRS9Q9BPW9 319 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 SLC22A4Q9H015 551 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 HDHD2Q9H0R4 259 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 FKBP14Q9NWM8 211 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 DKKL1Q9UK85 242 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 HHLA3Q9XRX5 114 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 TP53TG1Q9Y2A0 90 aa0.84□□□□□ -2.27
PTPN4-212ENST00000488896 PCYT1BQ9Y5K3 369 aaPredicted RBP0.84□□□□□ -2.27
PTPN4-212ENST00000488896 BAZ2BQ9UIF8 2168 aaKnown RBP0.84□□□□□ -2.28
PTPN4-212ENST00000488896 PIK3R4Q99570 1358 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 EVPLLA8MZ36 301 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 BHLHE40O14503 412 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 ZNF737O75373 536 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 PGLYRP1O75594 196 aaPredicted RBP0.83□□□□□ -2.28
PTPN4-212ENST00000488896 KRT7P08729 469 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 OCM2P0CE71 109 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 MIPP30301 263 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 MAGEA2P43356 314 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 SLCO1A2P46721 670 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 FABP5Q01469 135 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 MLLT11Q13015 90 aaPredicted RBP0.83□□□□□ -2.28
PTPN4-212ENST00000488896 C1orf195Q5TG92 126 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 OR10K2Q6IF99 312 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 TNFAIP8L2Q6P589 184 aaPredicted RBP0.83□□□□□ -2.28
PTPN4-212ENST00000488896 C10orf126Q8N4M7 172 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 OR8B12Q8NGG6 310 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 OR51T1Q8NGJ9 327 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 OR2T27Q8NH04 317 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 PIGXQ8TBF5 258 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 EEF1AKMT1Q8WVE0 214 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 ASB17Q8WXJ9 295 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 ASB13Q8WXK3 278 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 RAB8BQ92930 207 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 SMIM19Q96E16 107 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 TMA16Q96EY4 203 aaKnown RBP0.83□□□□□ -2.28
PTPN4-212ENST00000488896 ANKRD36BP1Q96IX9 119 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 TTTY13Q9BZ97 58 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 VCX3BQ9H321 246 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 HES4Q9HCC6 221 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 IMP3Q9NV31 184 aaKnown RBP0.83□□□□□ -2.28
PTPN4-212ENST00000488896 UBAP1Q9NZ09 502 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 USE1Q9NZ43 259 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 EMC3Q9P0I2 261 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 NAT8Q9UHE5 227 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 GREB1Q4ZG55 1949 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 DISP1Q96F81 1524 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 EVC2Q86UK5 1308 aa0.83□□□□□ -2.28
PTPN4-212ENST00000488896 DLG5Q8TDM6 1919 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 SLC16A4O15374 487 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 KLRC4O43908 158 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 CREBL2O60519 120 aaPredicted RBP0.82□□□□□ -2.28
PTPN4-212ENST00000488896 MT-CO2P00403 227 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 UCHL1P09936 223 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 COX5BP10606 129 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 RPL12P30050 165 aaKnown RBP0.82□□□□□ -2.28
PTPN4-212ENST00000488896 CD79BP40259 229 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 GABRA2P47869 451 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 FXYD7P58549 80 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 BTN3A2P78410 334 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 GLO1Q04760 184 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 FABP9Q0Z7S8 132 aa0.82□□□□□ -2.28
PTPN4-212ENST00000488896 TMEM155Q4W5P6 130 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms