RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 RASL11BQ9BPW5 248 aa5.62□□□□□ -1.51
UBR4-214ENST00000486515 SPIN2BQ9BPZ2 258 aa5.62□□□□□ -1.51
UBR4-214ENST00000486515 NABP2Q9BQ15 211 aa5.62□□□□□ -1.51
UBR4-214ENST00000486515 TMEM222Q9H0R3 208 aa5.62□□□□□ -1.51
UBR4-214ENST00000486515 MED28Q9H204 178 aa5.62□□□□□ -1.51
UBR4-214ENST00000486515 PLEKHA2Q9HB19 425 aa5.62□□□□□ -1.51
UBR4-214ENST00000486515 COMMD9Q9P000 198 aa5.62□□□□□ -1.51
UBR4-214ENST00000486515 ZNRD1Q9P1U0 126 aa5.62□□□□□ -1.51
UBR4-214ENST00000486515 ANK3Q12955 4377 aaKnown RBP5.62□□□□□ -1.51
UBR4-214ENST00000486515 hCG_2014768A0A024R1R8 64 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 C13orf42A0A1B0GVH6 325 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 C5orf51A6NDU8 294 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 LY6LH3BQJ8 138 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 H3BUX3 64 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 KRASP01116 189 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 AVPP01185 164 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 SNRNP70P08621 437 aaKnown RBP5.61□□□□□ -1.51
UBR4-214ENST00000486515 DHRS2Q13268 280 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 HNF4GQ14541 408 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 DEFB112Q30KQ8 113 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 KLF17Q5JT82 389 aaPredicted RBP5.61□□□□□ -1.51
UBR4-214ENST00000486515 LIAT1Q6ZQX7 453 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 THNSL2Q86YJ6 484 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 MRPL41Q8IXM3 137 aaKnown RBP5.61□□□□□ -1.51
UBR4-214ENST00000486515 ODF3L1Q8IXM7 274 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 C12orf45Q8N5I9 185 aaPredicted RBP5.61□□□□□ -1.51
UBR4-214ENST00000486515 ZNF383Q8NA42 475 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 OR5AN1Q8NGI8 311 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 OR4A16Q8NH70 328 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 ST6GALNAC6Q969X2 333 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 R3HDM4Q96D70 268 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 GALNT14Q96FL9 552 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 TP53RKQ96S44 253 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 MEGF9Q9H1U4 602 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 TNFRSF19Q9NS68 423 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 FKBP11Q9NYL4 201 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 TMED3Q9Y3Q3 217 aa5.61□□□□□ -1.51
UBR4-214ENST00000486515 EPPK1P58107 5090 aaKnown RBP5.61□□□□□ -1.51
UBR4-214ENST00000486515 PRKDCP78527 4128 aaKnown RBP5.61□□□□□ -1.51
UBR4-214ENST00000486515 A0A0B4J2A0 478 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 A0A1W2PPI3 338 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 MARCH11A6NNE9 402 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 LINC00473A8K010 186 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 H0YJW9 148 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 WRBO00258 174 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 NBR2O15453 112 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 OR2A4O95047 310 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 S1PR2O95136 353 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 VENTXO95231 258 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 SPDEFO95238 335 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 CNIH1O95406 144 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 HOXB5P09067 269 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 BTF3P20290 206 aaKnown RBP5.6□□□□□ -1.51
UBR4-214ENST00000486515 VDAC1P21796 283 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 UCP1P25874 307 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 MECP2P51608 486 aaKnown RBP5.6□□□□□ -1.51
UBR4-214ENST00000486515 DYNLT3P51808 116 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 CYCSP99999 105 aaKnown RBP5.6□□□□□ -1.51
UBR4-214ENST00000486515 DIAPH2-AS1Q14236 149 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 UTF1Q5T230 341 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 GSG1LQ6UXU4 331 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 C1orf229Q6ZS94 237 aaPredicted RBP5.6□□□□□ -1.51
UBR4-214ENST00000486515 SSX9Q7RTT3 188 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 C16orf82Q7Z2V1 217 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 OR4A5Q8NH83 315 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 MITD1Q8WV92 249 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 MRGPRFQ96AM1 343 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 RHOVQ96L33 236 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 OR2A7Q96R45 310 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 GPHA2Q96T91 129 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 SEC22CQ9BRL7 303 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 COMMD5Q9GZQ3 224 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 OR51J1Q9H342 316 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 ENY2Q9NPA8 101 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 ZFP57Q9NU63 452 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 METTL1Q9UBP6 276 aaKnown RBP5.6□□□□□ -1.51
UBR4-214ENST00000486515 SHPKQ9UHJ6 478 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 POMT1Q9Y6A1 747 aa5.6□□□□□ -1.51
UBR4-214ENST00000486515 A0A0A6YYJ9 748 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 HOXA3O43365 443 aaPredicted RBP5.59□□□□□ -1.51
UBR4-214ENST00000486515 CDS2O95674 445 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 IFNA17P01571 189 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 IGLV2-14P01704 120 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 RLN2P04090 185 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 FAM157CP0CG43 387 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 SPNP16150 400 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 CD24P25063 80 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 G6PCP35575 357 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 RPL30P62888 115 aaKnown RBP5.59□□□□□ -1.51
UBR4-214ENST00000486515 TMEM187Q14656 261 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 SMCO1Q147U7 214 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 LY6EQ16553 131 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 NDUFA5Q16718 116 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 TMEM177Q53S58 311 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 C9orf152Q5JTZ5 239 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 Q6YL49 198 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 TMEM86BQ8N661 226 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 SIGLECL1Q8N7X8 197 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 SLC35G3Q8N808 338 aa5.59□□□□□ -1.51
UBR4-214ENST00000486515 TEX45Q8NA69 505 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms