RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 NUBP2Q9Y5Y2 271 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 TNCP24821 2201 aa1.29□□□□□ -2.2
USH2A-204ENST00000481786 IGHV3-72A0A0B4J1Y9 119 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 A0A0U1RRA0 63 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 FUOMA2VDF0 154 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 PRORSD1PA6NEY8 169 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 OR4C46A6NHA9 309 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 OR5B21A6NL26 309 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 ZNF729A6NN14 1252 aaPredicted RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 DHRS7CA6NNS2 312 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 ZNF705EA8MWA4 302 aaPredicted RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 KPNA4O00629 521 aaPredicted RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 XKRYO14609 159 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 SLC16A7O60669 478 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 TPST2O60704 377 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 OR7A10O76100 309 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 HAND1O96004 215 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 BCHEP06276 602 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 SPART-AS1P0CW21 52 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 GABRR1P24046 479 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 ALDH3A1P30838 453 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 PTGFRP43088 359 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 OR1E2P47887 323 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 GPM6AP51674 278 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 CMC4P56277 68 aaPredicted RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 CLDN8P56748 225 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 RGS8P57771 180 aaPredicted RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 LINC00315P59091 139 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 KRTAP10-10P60014 251 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 AESQ08117 197 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 PPP1R8Q12972 351 aaKnown RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 DAZ2Q13117 558 aaKnown RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 PRDX4Q13162 271 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 DIAPH2-AS1Q14236 149 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 CASP8Q14790 479 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 MMDQ15546 238 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 GRK1Q15835 563 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 LRRC36Q1X8D7 754 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 ACOT6Q3I5F7 207 aaPredicted RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 CEACAM21Q3KPI0 293 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 AGKQ53H12 422 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 CYBRD1Q53TN4 286 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 SLX4IPQ5VYV7 408 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 HAGHLQ6PII5 290 aaPredicted RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 DHRS4L2Q6PKH6 230 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 UNQ5815/PRO19632Q6UWF5 114 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 FAM131AQ6UXB0 335 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 CLEC19AQ6UXS0 136 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 C3orf62Q6ZUJ4 267 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 LCA5Q86VQ0 697 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 PPP1R27Q86WC6 154 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 OR6V1Q8N148 313 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 TPRX1Q8N7U7 411 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 OR5B3Q8NH48 314 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 OR1L1Q8NH94 360 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 CD300LFQ8TDQ1 290 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 RTN4IP1Q8WWV3 396 aaPredicted RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 PHYHIPQ92561 330 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 EMG1Q92979 244 aaKnown RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 TMEM80Q96HE8 168 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 REEP6Q96HR9 211 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 OR52E6Q96RD3 313 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 PANX1Q96RD7 426 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 ANKRD60Q9BZ19 345 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 DPH3P1Q9H4G8 78 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 RGCCQ9H4X1 137 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 DAZ3Q9NR90 486 aaKnown RBP1.28□□□□□ -2.2
USH2A-204ENST00000481786 AIG1Q9NVV5 245 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 IFNKQ9P0W0 207 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 GHRLQ9UBU3 117 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 BTNL2Q9UIR0 455 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 PSG11Q9UQ72 335 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 LINC00588Q9Y4M8 146 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 LHFPL6Q9Y693 200 aa1.28□□□□□ -2.2
USH2A-204ENST00000481786 TRAV3A0A0B4J244 114 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 KBTBD11-OT1A0A1B0GTJ5 212 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 TMEM213A2RRL7 107 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 TMEM189A5PLL7 270 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 A8MWP6 167 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 ZNF736B4DX44 427 aaPredicted RBP1.27□□□□□ -2.21
USH2A-204ENST00000481786 H7C1C5 153 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 J3QT63 122 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 DYNC1I1O14576 645 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 NBR2O15453 112 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 MRPS14O60783 128 aaKnown RBP1.27□□□□□ -2.21
USH2A-204ENST00000481786 PEX11AO75192 247 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 GPX5O75715 221 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 S1PR2O95136 353 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 ANP32DO95626 131 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 CPSF4O95639 269 aaKnown RBP1.27□□□□□ -2.21
USH2A-204ENST00000481786 KRT75O95678 551 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 TRBV12-3P01733 135 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 LINC00032P0C843 101 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 NFYBP25208 207 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 IL3RAP26951 378 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 CRABP1P29762 137 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 RBM34P42696 430 aaKnown RBP1.27□□□□□ -2.21
USH2A-204ENST00000481786 MAGEA12P43365 314 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 CDKN1BP46527 198 aa1.27□□□□□ -2.21
USH2A-204ENST00000481786 REG1BP48304 166 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms