RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 VBP1P61758 197 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 PPP1CBP62140 327 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 LSM3P62310 102 aaKnown RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 LSM6P62312 80 aaKnown RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 RPS25P62851 125 aaKnown RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 HIST1H3AP68431 136 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 LOXL1Q08397 574 aaPredicted RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 ENDOGQ14249 297 aaKnown RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 CDK5R1Q15078 307 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 GUSBP1Q15486 140 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 SSX1Q16384 188 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 CEACAM16Q2WEN9 425 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 ZNF829Q3KNS6 432 aaPredicted RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 ALKBH6Q3KRA9 238 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 CCDC58Q4VC31 144 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 ACSM3Q53FZ2 586 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 CT45A1Q5HYN5 189 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 BCL2L15Q5TBC7 163 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 HIST2H3PS2Q5TEC6 136 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 FAM27BQ5VT28 67 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 TMEM53Q6P2H8 277 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 RPL22L1Q6P5R6 122 aaKnown RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 DEGS2Q6QHC5 323 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 LRRN1Q6UXK5 716 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 HIST2H3AQ71DI3 136 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 DPPA2Q7Z7J5 298 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 WDR86Q86TI4 376 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 DOLPP1Q86YN1 238 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 LGI3Q8N145 548 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 LRRC18Q8N456 261 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 SLC22A24Q8N4F4 322 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 ZNF676Q8N7Q3 588 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 CHST4Q8NCG5 386 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 OR6K3Q8NGY3 331 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 OR5AK2Q8NH90 309 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 CT45A3Q8NHU0 189 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 ZNF420Q8TAQ5 688 aaPredicted RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 PIFOQ8TCI5 191 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 HAVCR2Q8TDQ0 301 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 RAB2BQ8WUD1 216 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 C15orf40Q8WUR7 153 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 RNF133Q8WVZ7 376 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 GHSRQ92847 366 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 C12orf43Q96C57 262 aaKnown RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 ISOC1Q96CN7 298 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 SLAMF6Q96DU3 332 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 DOK1Q99704 481 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 BCL7BQ9BQE9 202 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 TMED9Q9BVK6 235 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 MROQ9BYG7 248 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 NAA50Q9GZZ1 169 aaKnown RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 OR51E2Q9H255 320 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 C1orf198Q9H425 327 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 EDA2RQ9HAV5 297 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 EXOSC4Q9NPD3 245 aaKnown RBP2.23□□□□□ -2.05
CBX3-207ENST00000481300 TMEM38BQ9NVV0 291 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 NDUFB11Q9NX14 153 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 MTCH1Q9NZJ7 389 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 OPN4Q9UHM6 478 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 ENPP5Q9UJA9 477 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 SSR3Q9UNL2 185 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 ZNF835Q9Y2P0 537 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 LHFPL6Q9Y693 200 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 R4GMQ9 66 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 FANCMQ8IYD8 2048 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 SEC16AO15027 2179 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 PCNX2A6NKB5 2137 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 PI4KAP42356 2102 aa2.23□□□□□ -2.05
CBX3-207ENST00000481300 TET2Q6N021 2002 aaPredicted RBP2.22□□□□□ -2.05
CBX3-207ENST00000481300 APC2O95996 2303 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 TMEM269A0A1B0GVZ9 245 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 A0A1B0GW55 424 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 TRDV1A0A1B0GX56 115 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 OR6C6A6NF89 314 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 TMEM212A6NML5 194 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 OR4C45A6NMZ5 311 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 EEF1E1-BLOC1S5C9J1V9 151 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 ZNF878C9JN71 531 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 F5H5K5 113 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 L7N2F9 121 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 GABRPO00591 440 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 EEF1E1O43324 174 aaKnown RBP2.22□□□□□ -2.05
CBX3-207ENST00000481300 SGCEO43556 437 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 GATBO75879 557 aaKnown RBP2.22□□□□□ -2.05
CBX3-207ENST00000481300 ARL6IP5O75915 188 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 LYZL6O75951 148 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 OR2F2O95006 317 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 YIF1AO95070 293 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 UBL3O95164 117 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 HLA-HP01893 362 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 APOC1P02654 83 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 DUX4L2P0CJ85 424 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 DUX4L3P0CJ86 424 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 DUX4L5P0CJ88 424 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 DUX4L6P0CJ89 424 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 DUX4L7P0CJ90 424 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 CD79AP11912 226 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 IL32P24001 234 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 HSD11B1P28845 292 aa2.22□□□□□ -2.05
CBX3-207ENST00000481300 OPRM1P35372 400 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms