RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 PUSL1Q8N0Z8 303 aaKnown RBP8.97□□□□□ -0.97
VTI1A-204ENST00000480057 OR11H6Q8NGC7 330 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 OR13D1Q8NGV5 346 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 OR4A5Q8NH83 315 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 SAT2Q96F10 170 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-204ENST00000480057 RHOVQ96L33 236 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 CLCC1Q96S66 551 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 CCL19Q99731 98 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 ATP5SQ99766 215 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 NABP2Q9BQ15 211 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 MRPL20Q9BYC9 149 aaKnown RBP8.97□□□□□ -0.97
VTI1A-204ENST00000480057 PARD6GQ9BYG4 376 aaPredicted RBP8.97□□□□□ -0.97
VTI1A-204ENST00000480057 UNKLQ9H9P5 680 aaKnown RBP8.97□□□□□ -0.97
VTI1A-204ENST00000480057 FKBP11Q9NYL4 201 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 PRNDQ9UKY0 176 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 ZNF257Q9Y2Q1 563 aa8.97□□□□□ -0.97
VTI1A-204ENST00000480057 YLPM1P49750 1951 aaKnown RBP8.97□□□□□ -0.97
VTI1A-204ENST00000480057 NXPH3O95157 252 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 SPP1P10451 314 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 PAX1P15863 534 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 PRTN3P24158 256 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 SULT1A2P50226 295 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 RAB5CP51148 216 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 ATP6V1FQ16864 119 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 OR4A47Q6IF82 309 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 OR4C13Q8NGP0 309 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 OR5C1Q8NGR4 320 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 VSTM2AQ8TAG5 236 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 DTD1Q8TEA8 209 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 LHX4Q969G2 390 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 GNPNAT1Q96EK6 184 aaPredicted RBP8.96□□□□□ -0.98
VTI1A-204ENST00000480057 BSCL2Q96G97 398 aaPredicted RBP8.96□□□□□ -0.98
VTI1A-204ENST00000480057 FAM210AQ96ND0 272 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 TSNAXQ99598 290 aaKnown RBP8.96□□□□□ -0.98
VTI1A-204ENST00000480057 SMIM3Q9BZL3 60 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 WFDC1Q9HC57 220 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 TMEM14BQ9NUH8 114 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 PFDN2Q9UHV9 154 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 WASHC3Q9Y3C0 194 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 KPTNQ9Y664 436 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 DOPEY1Q5JWR5 2465 aa8.96□□□□□ -0.98
VTI1A-204ENST00000480057 CFAP46Q8IYW2 2715 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 CEBPZOSA8MTT3 80 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 NUDT19A8MXV4 375 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 LEUTXA8MZ59 168 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 BUB1B-PAK6H3BSN5 160 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 UPK2O00526 184 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 NDUFS7O75251 213 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 RBMXL2O75526 392 aaKnown RBP8.95□□□□□ -0.98
VTI1A-204ENST00000480057 IGHV4-39P01824 125 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 ARG1P05089 322 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 FAM157CP0CG43 387 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 IAPPP10997 89 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 COX6B1P14854 86 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 LGALS7P47929 136 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 DYNLT3P51808 116 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 ATP5IP56385 69 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-204ENST00000480057 EIF4E3Q8N5X7 224 aaKnown RBP8.95□□□□□ -0.98
VTI1A-204ENST00000480057 Q8N7P7 452 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 TMED6Q8WW62 240 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 FLYWCH2Q96CP2 140 aaKnown RBP8.95□□□□□ -0.98
VTI1A-204ENST00000480057 QTRT1Q9BXR0 403 aaKnown RBP8.95□□□□□ -0.98
VTI1A-204ENST00000480057 ZNRD1Q9P1U0 126 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 ONECUT1Q9UBC0 465 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 POLR3KQ9Y2Y1 108 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-204ENST00000480057 STRAPQ9Y3F4 350 aaKnown RBP8.95□□□□□ -0.98
VTI1A-204ENST00000480057 DOCK11Q5JSL3 2073 aa8.95□□□□□ -0.98
VTI1A-204ENST00000480057 LY6LH3BQJ8 138 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 SHOXO15266 292 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 FOXH1O75593 365 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 CST7O76096 145 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 IFNA5P01569 189 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 IFNA17P01571 189 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 OR8U8P0C7N1 319 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 USF1P22415 310 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-204ENST00000480057 CEACAM3P40198 252 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 VDAC2P45880 294 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-204ENST00000480057 DSCR9P59020 149 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 HSPE1P61604 102 aaKnown RBP8.94□□□□□ -0.98
VTI1A-204ENST00000480057 LMO4P61968 165 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 BLOC1S1P78537 153 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 PAX2Q02962 417 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 SRSF1Q07955 248 aaKnown RBP eCLIP8.94□□□□□ -0.98
VTI1A-204ENST00000480057 SPANXN5Q5MJ07 72 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 FAM74A1Q5RGS3 127 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 SSX9Q7RTT3 188 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 HSD17B13Q7Z5P4 300 aaPredicted RBP8.94□□□□□ -0.98
VTI1A-204ENST00000480057 COMMD7Q86VX2 200 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 ZNF525Q8N782 197 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 OR4P4Q8NGL7 312 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 OR5B3Q8NH48 314 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 PINX1Q96BK5 328 aaKnown RBP8.94□□□□□ -0.98
VTI1A-204ENST00000480057 HARBI1Q96MB7 349 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 RNF5Q99942 180 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 PIMREGQ9BSJ6 248 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 HIPK2Q9H2X6 1198 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 NUP50Q9UKX7 468 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 TCF19Q9Y242 345 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 MALRD1Q5VYJ5 2156 aa8.94□□□□□ -0.98
VTI1A-204ENST00000480057 IGHV2-70DA0A0C4DH43 119 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms