RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 A0A1W2PP11 408 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 hADV38S2A0JD32 116 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 K7EP13 123 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 M0R143 59 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 ARPC5O15511 151 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 PDCD6O75340 191 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 CA11O75493 328 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 SIX6O95475 246 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 GCGP01275 180 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 TFF1P04155 84 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 CSN2P05814 226 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 PPIAL4GP0DN37 164 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 TPT1P13693 172 aaKnown RBP5.08□□□□□ -1.6
SF3B1-209ENST00000479532 FUT3P21217 361 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 BLVRBP30043 206 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-209ENST00000479532 TIRAPP58753 221 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 MEF2CQ06413 473 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-209ENST00000479532 SCGB2A2Q13296 93 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 FHL3Q13643 280 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 ATXN7L3Q14CW9 347 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-209ENST00000479532 RBMS2Q15434 407 aaKnown RBP5.08□□□□□ -1.6
SF3B1-209ENST00000479532 OR10K2Q6IF99 312 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 RAB12Q6IQ22 244 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 FAHD2BQ6P2I3 314 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-209ENST00000479532 Q6P435 159 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 TRAT1Q6PIZ9 186 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 C16orf54Q6UWD8 224 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF841Q6ZN19 808 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 Q6ZTK2 550 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 KIR3DL3Q8N743 410 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 SUMF2Q8NBJ7 301 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM104Q8NE00 496 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 OR2AK2Q8NG84 335 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 OR2D3Q8NGH3 330 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 LYPD6BQ8NI32 183 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 LGALS14Q8TCE9 139 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 FAHD2AQ96GK7 314 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 FAM210BQ96KR6 192 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 C1orf147Q96MC9 270 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-209ENST00000479532 DCTN5Q9BTE1 182 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 CHST6Q9GZX3 395 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 ATG5Q9H1Y0 275 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 PLEKHJ1Q9NW61 149 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 HIF1ANQ9NWT6 349 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 OR6C3Q9NZP0 311 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 ONECUT1Q9UBC0 465 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 RPUSD1Q9UJJ7 312 aaKnown RBP5.08□□□□□ -1.6
SF3B1-209ENST00000479532 TNFSF18Q9UNG2 199 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 INSIG2Q9Y5U4 225 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 TRBV6-7A0A0A0MS04 114 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 A0A0A6YYH2 397 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 TRAV24A0A0B4J272 114 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 KIR2DS1A0A191URI9 304 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 ANKRD20A5PA0PJZ0 165 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM30CPA0ZSE6 113 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 A6NJ64 397 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 PRSS47A8MTI9 375 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 M0R1W7 72 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF737O75373 536 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 LY6G6DO95868 133 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 CD74P04233 296 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 OR3A1P47881 315 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 NPBWR1P48145 328 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 GNG10P50151 68 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 TAS2R19P59542 299 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 QRFPP83859 136 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 AESQ08117 197 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 UNC119Q13432 240 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 JOSD1Q15040 202 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-209ENST00000479532 UBE2NLQ5JXB2 153 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 SLC35E4Q6ICL7 350 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 DUX4L9Q6RFH8 374 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-209ENST00000479532 NR2C2APQ86WQ0 139 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 BPIFB2Q8N4F0 458 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 UBAC2Q8NBM4 344 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 OR4S1Q8NGB4 309 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 OR10R2Q8NGX6 335 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 C8orf46Q8TAG6 207 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 NUDCD2Q8WVJ2 157 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 PCNPQ8WW12 178 aaKnown RBP5.07□□□□□ -1.6
SF3B1-209ENST00000479532 GALNT14Q96FL9 552 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 S100A16Q96FQ6 103 aaKnown RBP5.07□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF714Q96N38 554 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 ABHD1Q96SE0 405 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 LPAR5Q9H1C0 372 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 RIMS4Q9H426 269 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-209ENST00000479532 KCNK15Q9H427 330 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 SEPSECSQ9HD40 501 aaKnown RBP5.07□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM160Q9NX00 188 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 KCNIP1Q9NZI2 227 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 TRAPPC2LQ9UL33 140 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 HSF4Q9ULV5 492 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 UBE2J1Q9Y385 318 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-209ENST00000479532 LINC00312Q9Y6C7 94 aa5.07□□□□□ -1.6
SF3B1-209ENST00000479532 CCDC168Q8NDH2 2452 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 ODAMA1E959 279 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 SERPINE3A8MV23 424 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 PPP1R2P9O14990 202 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 LDLRAD4O15165 306 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 SOCS1O15524 211 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms