RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 WFIKKN1Q96NZ8 548 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 PCNX1Q96RV3 2341 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 TNCP24821 2201 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 DSCAMO60469 2012 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 A0A1W2PPQ1 181 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 SEC14L6B5MCN3 397 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 RPL23P62829 140 aaKnown RBP8.97□□□□□ -0.97
VPS52-217ENST00000478934 P2RY6Q15077 328 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 MSMO1Q15800 293 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 DEFB108BQ8NET1 73 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 MEGF10Q96KG7 1140 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 OR2V2Q96R30 315 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 DERL1Q9BUN8 251 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 SLC25A15Q9Y619 301 aa8.97□□□□□ -0.97
VPS52-217ENST00000478934 CLDN14O95500 239 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 MYOD1P15172 320 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 HNF1AP20823 631 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 CATR1Q13166 79 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 OR10P1Q8NGE3 313 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 OR4X1Q8NH49 305 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 PRR7Q8TB68 274 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 R3HDM4Q96D70 268 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 SNRNP40Q96DI7 357 aaKnown RBP8.96□□□□□ -0.97
VPS52-217ENST00000478934 PCGF1Q9BSM1 259 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 NPCDR1Q9BY65 106 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 HIPK2Q9H2X6 1198 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 PATZ1Q9HBE1 687 aaKnown RBP8.96□□□□□ -0.97
VPS52-217ENST00000478934 DCAF16Q9NXF7 216 aa8.96□□□□□ -0.97
VPS52-217ENST00000478934 M0R1X1 148 aa8.96□□□□□ -0.98
VPS52-217ENST00000478934 DUTP33316 252 aaKnown RBP8.96□□□□□ -0.98
VPS52-217ENST00000478934 CHRNA7P36544 502 aa8.96□□□□□ -0.98
VPS52-217ENST00000478934 GPR12P47775 334 aa8.96□□□□□ -0.98
VPS52-217ENST00000478934 TMEM241Q24JQ0 296 aa8.96□□□□□ -0.98
VPS52-217ENST00000478934 BSXQ3C1V8 233 aa8.96□□□□□ -0.98
VPS52-217ENST00000478934 PRDM13Q9H4Q3 707 aa8.96□□□□□ -0.98
VPS52-217ENST00000478934 ZNRD1Q9P1U0 126 aa8.96□□□□□ -0.98
VPS52-217ENST00000478934 C15orf62A8K5M9 175 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 B4DEV8 164 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 FAM90A26D6RGX4 464 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 PHOX2AO14813 284 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 SPINT2O43291 252 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 NPPCP23582 126 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 PSMB3P49720 205 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 RND2P52198 227 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 FAM3BP58499 235 aaPredicted RBP8.95□□□□□ -0.98
VPS52-217ENST00000478934 PNRC1Q12796 327 aaPredicted RBP8.95□□□□□ -0.98
VPS52-217ENST00000478934 MORN2Q502X0 79 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 MBNL2Q5VZF2 373 aaKnown RBP8.95□□□□□ -0.98
VPS52-217ENST00000478934 ABHD12Q8N2K0 398 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 ZBTB34Q8NCN2 500 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 PINX1Q96BK5 328 aaKnown RBP8.95□□□□□ -0.98
VPS52-217ENST00000478934 LURAP1Q96LR2 239 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 NAT8Q9UHE5 227 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 FAM215AQ9Y5M1 114 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 CEP295Q9C0D2 2601 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 RRHO14718 337 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 RAB29O14966 203 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 IFNA1P01562 189 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 GALR1P47211 349 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 ATP5G3P48201 142 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 ITLN1Q8WWA0 313 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 TMEM37Q8WXS4 190 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 PACRGQ96M98 296 aaPredicted RBP8.95□□□□□ -0.98
VPS52-217ENST00000478934 HIST1H2BLQ99880 126 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 TMEM147Q9BVK8 224 aa8.95□□□□□ -0.98
VPS52-217ENST00000478934 PTPRZ1P23471 2315 aaPredicted RBP8.94□□□□□ -0.98
VPS52-217ENST00000478934 SRRM5B3KS81 715 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 TM4SF5O14894 197 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 KBTBD11O94819 623 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 LOXL3P58215 753 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 CST9LP1Q5W188 147 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 Q8N7P7 452 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 C1orf162Q8NEQ5 155 aaPredicted RBP8.94□□□□□ -0.98
VPS52-217ENST00000478934 OR10A7Q8NGE5 316 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 P2RX4Q99571 388 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 CTXND1A0A1B0GTU2 59 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 H7BYZ3 331 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 FAM27E3Q08E93 113 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 FAM90A1Q86YD7 464 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 ZCCHC24Q8N2G6 241 aaKnown RBP8.94□□□□□ -0.98
VPS52-217ENST00000478934 ZNF709Q8N972 641 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 OR6C3Q9NZP0 311 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 DMRT1Q9Y5R6 373 aa8.94□□□□□ -0.98
VPS52-217ENST00000478934 PKDREJQ9NTG1 2253 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 ACACAQ13085 2346 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 A0A1B0GUS0 222 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 AHRRA9YTQ3 701 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 GYPAP02724 150 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 OPN1MWP04001 364 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 PFN1P07737 140 aaKnown RBP8.93□□□□□ -0.98
VPS52-217ENST00000478934 OPN1MW2P0DN77 364 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 OPN1MW3P0DN78 364 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 CD82P27701 267 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 PRAMEF5Q5TYX0 476 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 ZNF66Q6ZN08 573 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 CYP2G1PQ6ZSU1 146 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 ZNF114Q8NC26 417 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 OR13D1Q8NGV5 346 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 TMEM170AQ8WVE7 144 aa8.93□□□□□ -0.98
VPS52-217ENST00000478934 GFOD1Q9NXC2 390 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms