RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SAA1P0DJI8 122 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-215ENST00000478531 PGAM2P15259 253 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 TBPP20226 339 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 GNRHRP30968 328 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 CTAG1AP78358 180 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 SLC35B1P78383 322 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 PJVKQ0ZLH3 352 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 CATR1Q13166 79 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 EIF4EBP1Q13541 118 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-215ENST00000478531 VMA21Q3ZAQ7 101 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 PHLDA2Q53GA4 152 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 TMEM177Q53S58 311 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 SPANXN2Q5MJ10 180 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 VAX1Q5SQQ9 334 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 STEAP1BQ6NZ63 245 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 ZNF66Q6ZN08 573 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 LCNL1Q6ZST4 164 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 CMTM1Q8IZ96 169 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 VKORC1L1Q8N0U8 176 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 GRPEL2Q8TAA5 225 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 OR51J1Q9H342 316 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 WSB1Q9Y6I7 421 aa5.43□□□□□ -1.54
BRCA1-215ENST00000478531 GPR31O00270 319 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 CTDSPLO15194 276 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 RAB3DO95716 219 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 KIR2DS2P43631 304 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 LGALS7P47929 136 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 CX3CL1P78423 397 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 SSBP1Q04837 148 aaKnown RBP5.42□□□□□ -1.54
BRCA1-215ENST00000478531 MSMO1Q15800 293 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 TCTEX1D4Q5JR98 221 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 SSX9Q7RTT3 188 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 PPP1R27Q86WC6 154 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 SPAG16Q8N0X2 631 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 Q8N402 240 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 POC5Q8NA72 575 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 TMEM229BQ8NBD8 167 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 ZBTB34Q8NCN2 500 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 OR4C16Q8NGL9 310 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 OSR1Q8TAX0 266 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-215ENST00000478531 FAM110DQ8TAY7 271 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-215ENST00000478531 BORCS5Q969J3 196 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 FBXO7Q9Y3I1 522 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 V9GYH0 126 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 TRAV41A0A0B4J266 112 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 GSTZ1O43708 216 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-215ENST00000478531 OPN1MWP04001 364 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 CD74P04233 296 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 IGF1P05019 195 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 AKAIN1P0CW23 69 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 APELAP0DMC3 54 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 OPN1MW2P0DN77 364 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 OPN1MW3P0DN78 364 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 PI3P19957 117 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 S100GP29377 79 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 BRWD1-AS2P59051 145 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 UBE2KP61086 200 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 TNXAQ16473 311 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 TEX38Q6PEX7 206 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 SLC38A6Q8IZM9 456 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 ARRDC1Q8N5I2 433 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 CASTOR1Q8WTX7 329 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 ARPC1AQ92747 370 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 R3HDM4Q96D70 268 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 GON7Q9BXV9 100 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 MCUBQ9NWR8 336 aa5.42□□□□□ -1.54
BRCA1-215ENST00000478531 TSSC4Q9Y5U2 329 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-215ENST00000478531 A0A1W2PN81 502 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 NUDT19A8MXV4 375 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 DISC1C4P0D8 188 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 ARPC1BO15143 372 aaKnown RBP5.41□□□□□ -1.54
BRCA1-215ENST00000478531 PGLYRP1O75594 196 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-215ENST00000478531 S1PR2O95136 353 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 RPLP1P05386 114 aaKnown RBP5.41□□□□□ -1.54
BRCA1-215ENST00000478531 RPA2P15927 270 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 CHRNA7P36544 502 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 CD83Q01151 205 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 FXYD3Q14802 87 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 MEF2DQ14814 521 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 ZNF79Q15937 498 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 CXorf66Q5JRM2 361 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-215ENST00000478531 PRR31Q5SQ13 230 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 LPCAT3Q6P1A2 487 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 UNQ5815/PRO19632Q6UWF5 114 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 TREML4Q6UXN2 200 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 TBC1D26Q86UD7 250 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 CCDC190Q86UF4 302 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 NDUFA11Q86Y39 141 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 LFNGQ8NES3 379 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 OR6Q1Q8NGQ2 317 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 RHOVQ96L33 236 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 PHB2Q99623 299 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 SOSTQ9BQB4 213 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 THAP7Q9BT49 309 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-215ENST00000478531 RSRP1Q9BUV0 290 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 ZNF430Q9H8G1 570 aaPredicted RBP5.41□□□□□ -1.54
BRCA1-215ENST00000478531 SLC2A9Q9NRM0 540 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 PFDN2Q9UHV9 154 aa5.41□□□□□ -1.54
BRCA1-215ENST00000478531 DNAH3Q8TD57 4116 aa5.4□□□□□ -1.54
BRCA1-215ENST00000478531 ANKRD20A5PA0PJZ0 165 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 191.4 ms