RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 SLC35D1Q9NTN3 355 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 A0A0J9YW62 118 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 C3orf80F5H4A9 247 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 SPINK4O60575 86 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 TSPOP30536 169 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 LGALS4P56470 323 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 RPEL1Q2QD12 228 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 KIAA1644Q3SXP7 199 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 SPINK9Q5DT21 86 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 C17orf82Q86X59 251 aaPredicted RBP11.29□□□□□ -0.6
DFFB-209ENST00000477548 OR2D3Q8NGH3 330 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 CPT1CQ8TCG5 803 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 SRXN1Q9BYN0 137 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
DFFB-209ENST00000477548 CHCHD2Q9Y6H1 151 aaPredicted RBP11.29□□□□□ -0.6
DFFB-209ENST00000477548 PMS2P5A8MQ11 134 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 B9A039 149 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 CD27P26842 260 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 KCNS1Q96KK3 526 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 CHODLQ9H9P2 273 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 IL19Q9UHD0 177 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 DIDO1Q9BTC0 2240 aaKnown RBP11.28□□□□□ -0.6
DFFB-209ENST00000477548 TRAV24A0A0B4J272 114 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 PF4V1P10720 104 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 NTF4P34130 210 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 ZNF816Q0VGE8 651 aaPredicted RBP11.28□□□□□ -0.6
DFFB-209ENST00000477548 AAED1Q7RTV5 226 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 MMD2Q8IY49 270 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 DRAM1Q8N682 238 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 SPSB4Q96A44 273 aa11.28□□□□□ -0.6
DFFB-209ENST00000477548 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.28□□□□□ -0.6
DFFB-209ENST00000477548 TRBV6-6A0A0A6YYG2 114 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 IGHV2OR16-5A0A0B4J2B6 119 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 A0A1W2PS18 150 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 LRRC30A6NM36 301 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 RNF212BA8MTL3 300 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.27□□□□□ -0.6
DFFB-209ENST00000477548 M0QZ24 198 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 GDF9O60383 454 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 C3orf79P0CE67 100 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 VAMP3Q15836 100 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 CEACAM21Q3KPI0 293 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 WDR74Q6RFH5 385 aaPredicted RBP11.27□□□□□ -0.6
DFFB-209ENST00000477548 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.6
DFFB-209ENST00000477548 OR8I2Q8N0Y5 310 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 FSCN3Q9NQT6 498 aa11.27□□□□□ -0.6
DFFB-209ENST00000477548 CACNA1EQ15878 2313 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 PI4KAP42356 2102 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 ODAMA1E959 279 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 RAMP3O60896 148 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 TIAF1O95411 115 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 CYC1P08574 325 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 TNFSF4P23510 183 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 PSG7Q13046 419 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 BORCS7Q96B45 105 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 RCHY1Q96PM5 261 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 C1QTNF5Q9BXJ0 243 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 GNB1LQ9BYB4 327 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 DLL3Q9NYJ7 618 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 TRAPPC2LQ9UL33 140 aa11.27□□□□□ -0.61
DFFB-209ENST00000477548 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 IGHV2-70DA0A0C4DH43 119 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 LMO7DNF2Z398 122 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 NTF3P20783 257 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 ZNF83P51522 516 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 ST6GALNAC3Q8NDV1 305 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 KCNE4Q8WWG9 221 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 TXNDC17Q9BRA2 123 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
DFFB-209ENST00000477548 IGLV3-12A0A075B6K2 115 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 K7EN84 100 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 ZNF324O75467 553 aaPredicted RBP11.26□□□□□ -0.61
DFFB-209ENST00000477548 RPL19P84098 196 aaKnown RBP11.26□□□□□ -0.61
DFFB-209ENST00000477548 MORN2Q502X0 79 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 UHRF2Q96PU4 802 aa11.26□□□□□ -0.61
DFFB-209ENST00000477548 CCL2P13500 99 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 GFRA1P56159 465 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 OR10J3Q5JRS4 329 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 STUMQ69YW2 141 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 FAM19A2Q8N3H0 131 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 RAB1CQ92928 201 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 SFXN3Q9BWM7 321 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 PRDM14Q9GZV8 571 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 NPIPB11E5RHQ5 1161 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 ZIC3O60481 467 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 DSCR4P56555 118 aaPredicted RBP11.25□□□□□ -0.61
DFFB-209ENST00000477548 RPL31P62899 125 aaKnown RBP11.25□□□□□ -0.61
DFFB-209ENST00000477548 SLC25A45Q8N413 288 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 LOXL4Q96JB6 756 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 S1PR2O95136 353 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 NBEAP1P0C6P0 100 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 CD1BP29016 333 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 SLC35B1P78383 322 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 TGFBR3Q03167 851 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 TRIP6Q15654 476 aaKnown RBP11.25□□□□□ -0.61
DFFB-209ENST00000477548 TMEM249Q2WGJ8 235 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 LINC00596Q86U02 117 aa11.25□□□□□ -0.61
DFFB-209ENST00000477548 FAM58AQ8N1B3 248 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms