RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ZNF705AQ6ZN79 300 aaPredicted RBP9.29□□□□□ -0.92
COL27A1-204ENST00000477421 TIMD4Q96H15 378 aa9.29□□□□□ -0.92
COL27A1-204ENST00000477421 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
COL27A1-204ENST00000477421 ZNF331Q9NQX6 463 aaPredicted RBP9.29□□□□□ -0.92
COL27A1-204ENST00000477421 CARHSP1Q9Y2V2 147 aaKnown RBP9.29□□□□□ -0.92
COL27A1-204ENST00000477421 TMEM56-RWDD3S4R434 201 aa9.29□□□□□ -0.92
COL27A1-204ENST00000477421 NCBP2LA6PVI3 153 aaKnown RBP9.28□□□□□ -0.92
COL27A1-204ENST00000477421 RBP4P02753 201 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 CT45A6P0DMU7 189 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 CT45A5P0DMU8 189 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 CT45A7P0DMV0 189 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 PNRC1Q12796 327 aaPredicted RBP9.28□□□□□ -0.92
COL27A1-204ENST00000477421 CT45A1Q5HYN5 189 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 CT45A3Q8NHU0 189 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 TMEM171Q8WVE6 324 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 SH2D2AQ9NP31 389 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 A0A0G2JRQ6 117 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 CFPP27918 469 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 VMA21Q3ZAQ7 101 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 SPNS3Q6ZMD2 512 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 METRNQ9UJH8 293 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 PXMP4Q9Y6I8 212 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 DENND4AQ7Z401 1863 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 C9JQL5 133 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 LY86O95711 162 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 NAPSAO96009 420 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 RPS2P15880 293 aaKnown RBP9.28□□□□□ -0.92
COL27A1-204ENST00000477421 SUMO1P63165 101 aaKnown RBP9.28□□□□□ -0.92
COL27A1-204ENST00000477421 ID3Q02535 119 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 TFF3Q07654 80 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 PMS2P11Q13670 270 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 DHRS7BQ6IAN0 325 aaPredicted RBP9.28□□□□□ -0.92
COL27A1-204ENST00000477421 TGIF2LYQ8IUE0 185 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 TGIF2LXQ8IUE1 241 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 ZNF439Q8NDP4 499 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 SLC24A4Q8NFF2 622 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 VSIRQ9H7M9 311 aa9.28□□□□□ -0.92
COL27A1-204ENST00000477421 ADCYAP1P18509 176 aa9.27□□□□□ -0.92
COL27A1-204ENST00000477421 UBE2L3P68036 154 aaKnown RBP9.27□□□□□ -0.92
COL27A1-204ENST00000477421 HCP5Q6MZN7 132 aa9.27□□□□□ -0.92
COL27A1-204ENST00000477421 TEPPQ6URK8 271 aa9.27□□□□□ -0.92
COL27A1-204ENST00000477421 WDR82Q6UXN9 313 aa9.27□□□□□ -0.92
COL27A1-204ENST00000477421 C16orf82Q7Z2V1 217 aa9.27□□□□□ -0.92
COL27A1-204ENST00000477421 FLYWCH2Q96CP2 140 aaKnown RBP9.27□□□□□ -0.92
COL27A1-204ENST00000477421 GPR61Q9BZJ8 451 aa9.27□□□□□ -0.92
COL27A1-204ENST00000477421 IFT22Q9H7X7 185 aa9.27□□□□□ -0.92
COL27A1-204ENST00000477421 EML6Q6ZMW3 1958 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 PPIAL4EA0A075B759 164 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 PPIAL4DF5H284 164 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 PPIAL4FP0DN26 164 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 RTP5Q14D33 572 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 OR4D5Q8NGN0 318 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 WFIKKN1Q96NZ8 548 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 WDR61Q9GZS3 305 aaKnown RBP9.27□□□□□ -0.93
COL27A1-204ENST00000477421 NAT8BQ9UHF3 227 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 PPIAL4AQ9Y536 164 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 OR51B2Q9Y5P1 312 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 IGKV1-6A0A0C4DH72 117 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 CD3EP07766 207 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 KIR2DL2P43627 348 aaPredicted RBP9.27□□□□□ -0.93
COL27A1-204ENST00000477421 GNG4P50150 75 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 ZNF324BQ6AW86 544 aaPredicted RBP9.27□□□□□ -0.93
COL27A1-204ENST00000477421 Q6ZRM9 215 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 IL22RA2Q969J5 263 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 LSM10Q969L4 123 aaKnown RBP9.27□□□□□ -0.93
COL27A1-204ENST00000477421 SPSB4Q96A44 273 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 TCF19Q9Y242 345 aa9.27□□□□□ -0.93
COL27A1-204ENST00000477421 GAMTQ14353 236 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 FOXL2NBQ6ZUU3 175 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 OR5B3Q8NH48 314 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 SGMS2Q8NHU3 365 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 GTF3AQ92664 365 aaKnown RBP9.26□□□□□ -0.93
COL27A1-204ENST00000477421 TMEM18Q96B42 140 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 ABHD17AQ96GS6 310 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 USB1Q9BQ65 265 aaKnown RBP9.26□□□□□ -0.93
COL27A1-204ENST00000477421 PCGF1Q9BSM1 259 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 CLCF1Q9UBD9 225 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 FCN1O00602 326 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 OR10J1P30954 320 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 CAMPP49913 170 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 SLC35E4Q6ICL7 350 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 DBX2Q6ZNG2 339 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 MEGF10Q96KG7 1140 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 SGK494Q96LW2 274 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 PTPRSQ13332 1948 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 K7N7A8 449 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 REG1AP05451 166 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 FAM87AP0C7U9 286 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 LINC00518Q8N0U6 118 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 NPVFQ9HCQ7 196 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 CFAP54Q96N23 3096 aa9.26□□□□□ -0.93
COL27A1-204ENST00000477421 TNCP24821 2201 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 IQCF6A8MYZ5 107 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 KRTDAPP60985 99 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 SPCS3P61009 180 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 RPL30P62888 115 aaKnown RBP9.25□□□□□ -0.93
COL27A1-204ENST00000477421 HABP2Q14520 560 aaPredicted RBP9.25□□□□□ -0.93
COL27A1-204ENST00000477421 ZNF497Q6ZNH5 498 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 MDS2Q8NDY4 140 aa9.25□□□□□ -0.93
COL27A1-204ENST00000477421 OR1B1Q8NGR6 318 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms