RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 A0A1W2PPV4 95 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 LRRC30A6NM36 301 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 LIFP15018 202 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 ZNF16P17020 682 aaPredicted RBP12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 CD1BP29016 333 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 GPM6AP51674 278 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 PRAMEF20Q5VT98 475 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 PNKDQ8N490 385 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 OR5A2Q8NGI9 324 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 SGCZQ96LD1 299 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 IMMP1LQ96LU5 166 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 ALKBH7Q9BT30 221 aaPredicted RBP12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 DERL1Q9BUN8 251 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 SFXN3Q9BWM7 321 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 SLC35D1Q9NTN3 355 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 OR1A1Q9P1Q5 309 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 WDR83OSQ9Y284 106 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 TBL2Q9Y4P3 447 aaKnown RBP12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 C21orf140B9A014 251 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 RAC3P60763 192 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 TGFBR3Q03167 851 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 PMCHL1Q16048 86 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 C20orf204Q6ZNR8 217 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 APH1AQ96BI3 265 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 NRN1Q9NPD7 142 aa12.8□□□□□ -0.36
CLSTN1-205ENST00000477264 TRBV20OR9-2A0A075B6H5 130 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 SNURFLB1AK76 121 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 CXorf1O96002 111 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 C11orf52Q96A22 123 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 FGF23Q9GZV9 251 aaPredicted RBP12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 IL36RNQ9UBH0 155 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 TRAV24A0A0B4J272 114 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 A0A0J9YW62 118 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 EGR1P18146 543 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 AMTP48728 403 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 AAED1Q7RTV5 226 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 MRPL21Q7Z2W9 205 aaKnown RBP12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 MYPOPQ86VE0 399 aaPredicted RBP12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 DRAM1Q8N682 238 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 CPEB3Q8NE35 698 aaKnown RBP12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 OR1L1Q8NH94 360 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 IL1F10Q8WWZ1 152 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 ALKBH3Q96Q83 286 aaPredicted RBP12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 SRXN1Q9BYN0 137 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 GNB4Q9HAV0 340 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 DLL3Q9NYJ7 618 aa12.79□□□□□ -0.36
CLSTN1-205ENST00000477264 IGHV2-70DA0A0C4DH43 119 aa12.78□□□□□ -0.36
CLSTN1-205ENST00000477264 RAB29O14966 203 aa12.78□□□□□ -0.36
CLSTN1-205ENST00000477264 CATR1Q13166 79 aa12.78□□□□□ -0.36
CLSTN1-205ENST00000477264 CEACAM16Q2WEN9 425 aa12.78□□□□□ -0.36
CLSTN1-205ENST00000477264 SMIM15Q7Z3B0 74 aa12.78□□□□□ -0.36
CLSTN1-205ENST00000477264 PPP1R32Q7Z5V6 425 aa12.78□□□□□ -0.36
CLSTN1-205ENST00000477264 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
CLSTN1-205ENST00000477264 IGHV2-26A0A0B4J1V2 119 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 IGHV2OR16-5A0A0B4J2B6 119 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 IGHV1-69-2A0A0G2JMI3 117 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 OR5B21A6NL26 309 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 ZNF324O75467 553 aaPredicted RBP12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 S1PR2O95136 353 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 CELA2AP08217 269 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 IER3P46695 156 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 PRRX1P54821 245 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 OCC1Q8TAD7 63 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 CLN8Q9UBY8 286 aa12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 ZFHX2Q9C0A1 2572 aaPredicted RBP12.77□□□□□ -0.36
CLSTN1-205ENST00000477264 ZNF292O60281 2723 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 ODAMA1E959 279 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 ZIC3O60481 467 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 MT-CO2P00403 227 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 OR10J4P0C629 311 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 PATE4P0C8F1 98 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 STAG3L2P0CL84 134 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 STAG3L3P0CL85 134 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 TSPOP30536 169 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 OPRK1P41145 380 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 RHOBP62745 196 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 HTD2P86397 168 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 KRTCAP3Q53RY4 240 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 FAM58AQ8N1B3 248 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 ZNF645Q8N7E2 425 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 Q8N7P7 452 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 PKIBQ9C010 78 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 KCNIP1Q9NZI2 227 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 CUL9Q8IWT3 2517 aa12.77□□□□□ -0.37
CLSTN1-205ENST00000477264 TRAV30A0A087WSZ9 112 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 SCO2A0A1W2PP80 73 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 PGPEP1LA6NFU8 196 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 ZNF716A6NP11 495 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 WDR1O75083 606 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 TNFSF4P23510 183 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 FBLN7Q53RD9 439 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 ASCL5Q7RTU5 278 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 MCEMP1Q8IX19 187 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 MMD2Q8IY49 270 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 UHRF2Q96PU4 802 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 FAM103A1Q9BTL3 118 aaKnown RBP12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 TUBG2Q9NRH3 451 aa12.76□□□□□ -0.37
CLSTN1-205ENST00000477264 ARHGAP21Q5T5U3 1957 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms