RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 C9orf152Q5JTZ5 239 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 WFDC9Q8NEX5 89 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 ZNF486Q96H40 463 aaPredicted RBP9.37□□□□□ -0.91
CLIP2-204ENST00000474962 TSNAXQ99598 290 aaKnown RBP9.37□□□□□ -0.91
CLIP2-204ENST00000474962 RNF5Q99942 180 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 RASL11BQ9BPW5 248 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 FXYD6Q9H0Q3 95 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 HRASLSQ9HDD0 168 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 COPZ2Q9P299 210 aa9.37□□□□□ -0.91
CLIP2-204ENST00000474962 LINC00473A8K010 186 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 SHOXO15266 292 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 FGF16O43320 207 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 ZNF735P0CB33 412 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 LGALS7P47929 136 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 LINC00205P59089 165 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 SURF2Q15527 256 aaPredicted RBP9.36□□□□□ -0.91
CLIP2-204ENST00000474962 PHLDA2Q53GA4 152 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 OR2B11Q5JQS5 317 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 LHFPL1Q86WI0 220 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 CCDC71LQ8N9Z2 235 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 OR51H1Q8NH63 302 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 MARCH1Q8TCQ1 289 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 CD300LFQ8TDQ1 290 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 C5orf30Q96GV9 206 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 C7orf50Q9BRJ6 194 aaKnown RBP9.36□□□□□ -0.91
CLIP2-204ENST00000474962 RSRP1Q9BUV0 290 aa9.36□□□□□ -0.91
CLIP2-204ENST00000474962 NBR2O15453 112 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 PGLYRP1O75594 196 aaPredicted RBP9.35□□□□□ -0.91
CLIP2-204ENST00000474962 CRYZL1O95825 349 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 IGLV2-14P01704 120 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 RLN1P04808 185 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 CD33P20138 364 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 RPL30P62888 115 aaKnown RBP9.35□□□□□ -0.91
CLIP2-204ENST00000474962 ZNF329Q86UD4 541 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 SPAG16Q8N0X2 631 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 OR4S2Q8NH73 311 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 RBMXL1Q96E39 390 aaKnown RBP9.35□□□□□ -0.91
CLIP2-204ENST00000474962 HARBI1Q96MB7 349 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 GPHA2Q96T91 129 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 SDHCQ99643 169 aaPredicted RBP9.35□□□□□ -0.91
CLIP2-204ENST00000474962 AIFM2Q9BRQ8 373 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 LIN7CQ9NUP9 197 aaKnown RBP9.35□□□□□ -0.91
CLIP2-204ENST00000474962 SLC2A8Q9NY64 477 aa9.35□□□□□ -0.91
CLIP2-204ENST00000474962 TSSC4Q9Y5U2 329 aaPredicted RBP9.35□□□□□ -0.91
CLIP2-204ENST00000474962 LINC01548A6NM66 108 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 HRASP01112 189 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 IGKV1-16P04430 117 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 CTSDP07339 412 aaPredicted RBP9.34□□□□□ -0.91
CLIP2-204ENST00000474962 PF4V1P10720 104 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 F2RL1P55085 397 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 PIGPP57054 158 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 VMA21Q3ZAQ7 101 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 TMEM177Q53S58 311 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 REC114Q7Z4M0 266 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 TBC1D26Q86UD7 250 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 TCTEX1D1Q8N7M0 179 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 OR13C8Q8NGS7 320 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
CLIP2-204ENST00000474962 MRAPQ8TCY5 172 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 DDB2Q92466 427 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 NOL4LQ96MY1 436 aaPredicted RBP9.34□□□□□ -0.91
CLIP2-204ENST00000474962 SLC25A21Q9BQT8 299 aaPredicted RBP9.34□□□□□ -0.91
CLIP2-204ENST00000474962 SLC2A9Q9NRM0 540 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 AURKAIP1Q9NWT8 199 aaPredicted RBP9.34□□□□□ -0.91
CLIP2-204ENST00000474962 LINC00527Q9UJ94 153 aa9.34□□□□□ -0.91
CLIP2-204ENST00000474962 TEX13DA0A0J9YY54 714 aaPredicted RBP9.33□□□□□ -0.92
CLIP2-204ENST00000474962 MPPED1O15442 326 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 HPRT1P00492 218 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 PI3P19957 117 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 F2RP25116 425 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 RBMS2Q15434 407 aaKnown RBP9.33□□□□□ -0.92
CLIP2-204ENST00000474962 LIN54Q6MZP7 749 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 MZT2BQ6NZ67 158 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 Q8N6K4 173 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 C5orf56Q8N8D9 126 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 NPBQ8NG41 125 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 RITA1Q96K30 269 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 TSC22D3Q99576 134 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 METTL1Q9UBP6 276 aaKnown RBP9.33□□□□□ -0.92
CLIP2-204ENST00000474962 GPR132Q9UNW8 380 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 KCNIP3Q9Y2W7 256 aa9.33□□□□□ -0.92
CLIP2-204ENST00000474962 PSMB11A5LHX3 300 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 RRHO14718 337 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 RBFOX2O43251 390 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLIP2-204ENST00000474962 LYRM1O43325 122 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 SLC25A17O43808 307 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 UPK1BO75841 260 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 SPDEFO95238 335 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 SERPINE2P07093 398 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 AKR1C4P17516 323 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 CNTFRP26992 372 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 LPAR6P43657 344 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 DEFA1P59665 94 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 DEFA3P59666 94 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 ERVK-16P61578 105 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 RND3P61587 244 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 EIF4EBP1Q13541 118 aaPredicted RBP9.32□□□□□ -0.92
CLIP2-204ENST00000474962 PSG5Q15238 335 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 C5orf64Q2M2E5 130 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 KHDC1LQ5JSQ8 128 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms