RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 NKG7Q16617 165 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 NSUN5P1Q3KNT7 163 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 LINC00305Q7Z4B0 112 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 C1orf210Q8IVY1 113 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 PNKDQ8N490 385 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 UCN2Q96RP3 112 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 SIGMAR1Q99720 223 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 NPCDR1Q9BY65 106 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 KLK13Q9UKR3 277 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 M0R2P5 195 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 EDIL3O43854 480 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 ABHD12Q8N2K0 398 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 OR51G1Q8NGK1 321 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 NABP2Q9BQ15 211 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 MARVELD1Q9BSK0 173 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 SF3B5Q9BWJ5 86 aaKnown RBP5.93□□□□□ -1.46
BRCA1-210ENST00000471181 LRP5O75197 1615 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 IGLV3-10A0A075B6K4 115 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 SPAARA0A1B0GVQ0 90 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 IFI27P40305 119 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-210ENST00000471181 RAG2P55895 527 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 SERF2P84101 59 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 OCIAD2Q56VL3 154 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 C9orf62Q8N4C0 152 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 ABHD1Q96SE0 405 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 CHCHD5Q9BSY4 110 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 CHST5Q9GZS9 411 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 G6PC2Q9NQR9 355 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 MBD1Q9UIS9 605 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-210ENST00000471181 LIPT2A6NK58 231 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 SPINT1O43278 529 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 CBLN1P23435 193 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 DTX2Q86UW9 622 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 OR4X2Q8NGF9 303 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 C10orf35Q96D05 121 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 VKORC1Q9BQB6 163 aa5.93□□□□□ -1.46
BRCA1-210ENST00000471181 IGHV3OR16-8A0A075B7F1 116 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 PRB3Q04118 309 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-210ENST00000471181 CENPWQ5EE01 88 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 DEFB121Q5J5C9 76 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 DCAF12L2Q5VW00 463 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 ZFAND6Q6FIF0 208 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 C19orf48Q6RUI8 117 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 WNT2BQ93097 391 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 GGTLC1Q9BX51 225 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 LTBP3Q9NS15 1303 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 OR2H2O95918 312 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 FGF9P31371 208 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-210ENST00000471181 GLRXP35754 106 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 TEX45Q8NA69 505 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 CLDND2Q8NHS1 167 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 MARS2Q96GW9 593 aaKnown RBP5.92□□□□□ -1.46
BRCA1-210ENST00000471181 IGHV1OR21-1A0A087WYE8 117 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 TRBV9A0A0B4J1U6 114 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 MGST3O14880 152 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 GLULP15104 373 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 ZNF585BQ52M93 769 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 FAM219BQ5XKK7 198 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 FBXW9Q5XUX1 488 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 CBLN3Q6UW01 205 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 ZNF826PQ6ZT77 177 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 GPBAR1Q8TDU6 330 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 GTF3AQ92664 365 aaKnown RBP5.92□□□□□ -1.46
BRCA1-210ENST00000471181 TXNDC17Q9BRA2 123 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 ST20Q9HBF5 79 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 A8MWV9 139 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 OGG1O15527 345 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 C1QL1O75973 258 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 CD7P09564 240 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 FHITP49789 147 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 LSM6P62312 80 aaKnown RBP5.92□□□□□ -1.46
BRCA1-210ENST00000471181 UNC119Q13432 240 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 TNFRSF14Q92956 283 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 SHISA4Q96DD7 197 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 KCNK17Q96T54 332 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 SLIRPQ9GZT3 109 aaKnown RBP5.92□□□□□ -1.46
BRCA1-210ENST00000471181 ST6GALNAC2Q9UJ37 374 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 H0Y980 276 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 CTDSPLO15194 276 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 PAX4O43316 350 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 CELA2BP08218 269 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-210ENST00000471181 CCL3P10147 92 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 WFDC12Q8WWY7 111 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 TAF15Q92804 592 aaKnown RBP eCLIP5.92□□□□□ -1.466e-6■□□□□ 11.2
BRCA1-210ENST00000471181 TNFRSF12AQ9NP84 129 aa5.92□□□□□ -1.46
BRCA1-210ENST00000471181 ZG16O60844 167 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 SCTP09683 121 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 CT62P0C5K7 136 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 FHL5Q5TD97 284 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 C5orf30Q96GV9 206 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 RASL10BQ96S79 203 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 TTTY12Q9BZ98 90 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 PEMTQ9UBM1 199 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 ZNF257Q9Y2Q1 563 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 MYH7P12883 1935 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 H3BMM0 161 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 HMGA1P17096 107 aaKnown RBP5.91□□□□□ -1.46
BRCA1-210ENST00000471181 NRN1LQ496H8 165 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 TMEM240Q5SV17 173 aa5.91□□□□□ -1.46
BRCA1-210ENST00000471181 LDLRAD1Q5T700 205 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms