RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 RYDENQ9NUL5 291 aaKnown RBP8.04□□□□□ -1.12
HDAC3-205ENST00000469550 HCFC1P51610 2035 aa8.04□□□□□ -1.12
HDAC3-205ENST00000469550 F8P00451 2351 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 PDE6DO43924 150 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 SOX15O60248 233 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 YPEL1O60688 119 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 LILRA1O75019 489 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 TNFSF13O75888 250 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 HPRT1P00492 218 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 IGFBP2P18065 325 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 PPP1CBP62140 327 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 SELENOTP62341 195 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 VWC2Q2TAL6 325 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 C20orf204Q6ZNR8 217 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 MOB1BQ7L9L4 216 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 LINC01551Q86U37 167 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 OR56B2PQ8NGI1 322 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 FAM57AQ8TBR7 257 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 YPEL2Q96QA6 119 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 DIRC2Q96SL1 478 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 MIEN1Q9BRT3 115 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 GPR35Q9HC97 309 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 HSPB7Q9UBY9 170 aa8.03□□□□□ -1.12
HDAC3-205ENST00000469550 ANKRD17O75179 2603 aaKnown RBP8.03□□□□□ -1.12
HDAC3-205ENST00000469550 RNF212BA8MTL3 300 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 KLRC4-KLRK1H3BQV0 150 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 CCL3P10147 92 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 B3GALT5-AS1P59052 145 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 FAM78BQ5VT40 261 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 TEX43Q6ZNM6 134 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 BATF2Q8N1L9 274 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 ALKBH3Q96Q83 286 aaPredicted RBP8.02□□□□□ -1.12
HDAC3-205ENST00000469550 TBX15Q96SF7 602 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 TXNDC17Q9BRA2 123 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 TMEM106BQ9NUM4 274 aa8.02□□□□□ -1.12
HDAC3-205ENST00000469550 TRAV9-1A0A075B6T8 112 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 TRAV24A0A0B4J272 114 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 A0A0U1RQK1 487 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF320A2RRD8 509 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 PMS2P5A8MQ11 134 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 F6UZH7 168 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 HS3ST1O14792 307 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 PAGE4O60829 102 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 NPPCP23582 126 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 SRD5A2P31213 254 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 MEOX1P50221 254 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 GPM6AP51674 278 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 CARD18P57730 90 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 CLEC12BQ2HXU8 276 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 FGFRL1Q8N441 504 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 CPEB3Q8NE35 698 aaKnown RBP8.02□□□□□ -1.13
HDAC3-205ENST00000469550 OR5P3Q8WZ94 311 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 SLC25A22Q9H936 323 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 ELOVL5Q9NYP7 299 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 IL36RNQ9UBH0 155 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 AKAP9Q99996 3911 aa8.02□□□□□ -1.13
HDAC3-205ENST00000469550 KIAA1549Q9HCM3 1950 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 CSMD1Q96PZ7 3565 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF705FA8MVS1 300 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 C11orf94C9JXX5 98 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 SS18L1O75177 396 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 P0C879 139 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF705DP0CH99 300 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF705BP0CI00 300 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 CHRNA7P36544 502 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 RPL29P47914 159 aaKnown RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 SSR4P51571 173 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 KRTAP10-9P60411 292 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 MSMO1Q15800 293 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 PRSS8Q16651 343 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 FFAR4Q5NUL3 377 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 GGNQ86UU5 652 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 TMEM256Q8N2U0 113 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 ZBTB34Q8NCN2 500 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 RAB1CQ92928 201 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 TMEM45BQ96B21 275 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 GMPPAQ96IJ6 420 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 KCNIP2Q9NS61 270 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 MRPS18CQ9Y3D5 142 aaKnown RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 OR5B21A6NL26 309 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 C17orf112F2Z3M2 114 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 HSPB6O14558 160 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 SYNGR4O95473 234 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 GCH1P30793 250 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 TPPP2P59282 170 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 TFF3Q07654 80 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 OR8G2PQ6IF36 304 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF705AQ6ZN79 300 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 MRPL21Q7Z2W9 205 aaKnown RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 NUFIP2Q7Z417 695 aaKnown RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 ZNF709Q8N972 641 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 OR10P1Q8NGE3 313 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 CMTM2Q8TAZ6 248 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 GATAD1Q8WUU5 269 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 APOBEC3DQ96AK3 386 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-205ENST00000469550 NPCDR1Q9BY65 106 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 OR51B6Q9H340 312 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 OR1A1Q9P1Q5 309 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 PPP1R3CQ9UQK1 317 aa8.01□□□□□ -1.13
HDAC3-205ENST00000469550 MED12Q93074 2177 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms