RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 HTR4Q13639 388 aa2.55□□□□□ -2
VPS50-209ENST00000467326 CCL15Q16663 113 aa2.55□□□□□ -2
VPS50-209ENST00000467326 TMEM183BQ1AE95 376 aa2.55□□□□□ -2
VPS50-209ENST00000467326 FAM135BQ49AJ0 1406 aa2.55□□□□□ -2
VPS50-209ENST00000467326 MPV17L2Q567V2 206 aa2.55□□□□□ -2
VPS50-209ENST00000467326 LCE1CQ5T751 118 aa2.55□□□□□ -2
VPS50-209ENST00000467326 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
VPS50-209ENST00000467326 UHRF1BP1Q6BDS2 1440 aa2.55□□□□□ -2
VPS50-209ENST00000467326 SSH2Q76I76 1423 aa2.55□□□□□ -2
VPS50-209ENST00000467326 SGPP2Q8IWX5 399 aa2.55□□□□□ -2
VPS50-209ENST00000467326 BAP18Q8IXM2 172 aa2.55□□□□□ -2
VPS50-209ENST00000467326 TMEM183AQ8IXX5 376 aa2.55□□□□□ -2
VPS50-209ENST00000467326 LINC01555Q8NAE3 123 aa2.55□□□□□ -2
VPS50-209ENST00000467326 OR8A1Q8NGG7 326 aa2.55□□□□□ -2
VPS50-209ENST00000467326 FAM104AQ969W3 186 aa2.55□□□□□ -2
VPS50-209ENST00000467326 STARD4Q96DR4 205 aa2.55□□□□□ -2
VPS50-209ENST00000467326 GNPNAT1Q96EK6 184 aaPredicted RBP2.55□□□□□ -2
VPS50-209ENST00000467326 TRIB3Q96RU7 358 aa2.55□□□□□ -2
VPS50-209ENST00000467326 CXorf21Q9HAI6 301 aa2.55□□□□□ -2
VPS50-209ENST00000467326 GPR84Q9NQS5 396 aa2.55□□□□□ -2
VPS50-209ENST00000467326 TVP23BQ9NYZ1 205 aa2.55□□□□□ -2
VPS50-209ENST00000467326 SLC23A2Q9UGH3 650 aa2.55□□□□□ -2
VPS50-209ENST00000467326 LAMTOR2Q9Y2Q5 125 aa2.55□□□□□ -2
VPS50-209ENST00000467326 RBM7Q9Y580 266 aaKnown RBP2.55□□□□□ -2
VPS50-209ENST00000467326 HEY1Q9Y5J3 304 aa2.55□□□□□ -2
VPS50-209ENST00000467326 ZNF706Q9Y5V0 76 aaPredicted RBP2.55□□□□□ -2
VPS50-209ENST00000467326 TDRD6O60522 2096 aaKnown RBP2.54□□□□□ -2
VPS50-209ENST00000467326 MTCL1Q9Y4B5 1905 aaKnown RBP2.54□□□□□ -2
VPS50-209ENST00000467326 ATRNO75882 1429 aa2.54□□□□□ -2
VPS50-209ENST00000467326 ABCC12Q96J65 1359 aa2.54□□□□□ -2
VPS50-209ENST00000467326 IGLV1-50A0A075B6I6 118 aa2.54□□□□□ -2
VPS50-209ENST00000467326 TRBV19A0A075B6N1 114 aa2.54□□□□□ -2
VPS50-209ENST00000467326 TRAV36DV7A0A075B6V5 113 aa2.54□□□□□ -2
VPS50-209ENST00000467326 LOC102724200A0A096LPH7 203 aaPredicted RBP2.54□□□□□ -2
VPS50-209ENST00000467326 J3QRK9 145 aa2.54□□□□□ -2
VPS50-209ENST00000467326 M0R381 172 aa2.54□□□□□ -2
VPS50-209ENST00000467326 POP7O75817 140 aaKnown RBP2.54□□□□□ -2
VPS50-209ENST00000467326 TNFSF15O95150 251 aa2.54□□□□□ -2
VPS50-209ENST00000467326 ZNF682O95780 498 aa2.54□□□□□ -2
VPS50-209ENST00000467326 MAS1P04201 325 aa2.54□□□□□ -2
VPS50-209ENST00000467326 METTL15P1P0C7V9 234 aa2.54□□□□□ -2
VPS50-209ENST00000467326 DNAJB13P59910 316 aa2.54□□□□□ -2
VPS50-209ENST00000467326 ATP5G2Q06055 141 aa2.54□□□□□ -2
VPS50-209ENST00000467326 MMDQ15546 238 aa2.54□□□□□ -2
VPS50-209ENST00000467326 CST6Q15828 149 aa2.54□□□□□ -2
VPS50-209ENST00000467326 DNLZQ5SXM8 178 aa2.54□□□□□ -2
VPS50-209ENST00000467326 LYRM7Q5U5X0 104 aa2.54□□□□□ -2
VPS50-209ENST00000467326 EBLN2Q6P2I7 272 aa2.54□□□□□ -2
VPS50-209ENST00000467326 LRP11Q86VZ4 500 aa2.54□□□□□ -2
VPS50-209ENST00000467326 PDPNQ86YL7 162 aa2.54□□□□□ -2
VPS50-209ENST00000467326 SLC22A24Q8N4F4 322 aa2.54□□□□□ -2
VPS50-209ENST00000467326 SLC25A29Q8N8R3 303 aa2.54□□□□□ -2
VPS50-209ENST00000467326 ZDHHC22Q8N966 263 aa2.54□□□□□ -2
VPS50-209ENST00000467326 ZNF555Q8NEP9 628 aa2.54□□□□□ -2
VPS50-209ENST00000467326 NUP35Q8NFH5 326 aa2.54□□□□□ -2
VPS50-209ENST00000467326 OR13C4Q8NGS5 318 aa2.54□□□□□ -2
VPS50-209ENST00000467326 RTN4IP1Q8WWV3 396 aaPredicted RBP2.54□□□□□ -2
VPS50-209ENST00000467326 ISOC1Q96CN7 298 aa2.54□□□□□ -2
VPS50-209ENST00000467326 OR2A5Q96R48 311 aa2.54□□□□□ -2
VPS50-209ENST00000467326 ZNF382Q96SR6 550 aa2.54□□□□□ -2
VPS50-209ENST00000467326 THTPAQ9BU02 230 aa2.54□□□□□ -2
VPS50-209ENST00000467326 GGTLC1Q9BX51 225 aa2.54□□□□□ -2
VPS50-209ENST00000467326 C20orf27Q9GZN8 174 aa2.54□□□□□ -2
VPS50-209ENST00000467326 MED23Q9ULK4 1368 aa2.53□□□□□ -2
VPS50-209ENST00000467326 IGSF9BQ9UPX0 1349 aa2.53□□□□□ -2
VPS50-209ENST00000467326 TRAV9-1A0A075B6T8 112 aa2.53□□□□□ -2
VPS50-209ENST00000467326 A0A096LPI6 279 aa2.53□□□□□ -2
VPS50-209ENST00000467326 IGHV1-45A0A0A0MS14 117 aa2.53□□□□□ -2
VPS50-209ENST00000467326 IGHV3-66A0A0C4DH42 116 aa2.53□□□□□ -2
VPS50-209ENST00000467326 TMEM269A0A1B0GVZ9 245 aa2.53□□□□□ -2
VPS50-209ENST00000467326 C5orf63A6NC05 138 aa2.53□□□□□ -2
VPS50-209ENST00000467326 OR5H14A6NHG9 310 aa2.53□□□□□ -2
VPS50-209ENST00000467326 C4orf51C9J302 202 aa2.53□□□□□ -2
VPS50-209ENST00000467326 IGLV2-8P01709 118 aa2.53□□□□□ -2
VPS50-209ENST00000467326 IGHV3-11P01762 117 aa2.53□□□□□ -2
VPS50-209ENST00000467326 CSN2P05814 226 aa2.53□□□□□ -2
VPS50-209ENST00000467326 ZNF688P0C7X2 276 aa2.53□□□□□ -2
VPS50-209ENST00000467326 SMIM17P0DL12 118 aa2.53□□□□□ -2
VPS50-209ENST00000467326 CNTFRP26992 372 aa2.53□□□□□ -2
VPS50-209ENST00000467326 BLVRBP30043 206 aaPredicted RBP2.53□□□□□ -2
VPS50-209ENST00000467326 CMPK1P30085 196 aa2.53□□□□□ -2
VPS50-209ENST00000467326 NMUP48645 174 aa2.53□□□□□ -2
VPS50-209ENST00000467326 EIF2B2P49770 351 aaKnown RBP2.53□□□□□ -2
VPS50-209ENST00000467326 RBP2P50120 134 aa2.53□□□□□ -2
VPS50-209ENST00000467326 DEFA1P59665 94 aa2.53□□□□□ -2
VPS50-209ENST00000467326 DHRS2Q13268 280 aa2.53□□□□□ -2
VPS50-209ENST00000467326 TMEM241Q24JQ0 296 aa2.53□□□□□ -2
VPS50-209ENST00000467326 MRPL2Q5T653 305 aaKnown RBP2.53□□□□□ -2
VPS50-209ENST00000467326 HES3Q5TGS1 186 aa2.53□□□□□ -2
VPS50-209ENST00000467326 CEMP1Q6PRD7 247 aaPredicted RBP2.53□□□□□ -2
VPS50-209ENST00000467326 Q6Q795 121 aa2.53□□□□□ -2
VPS50-209ENST00000467326 LYPD2Q6UXB3 125 aa2.53□□□□□ -2
VPS50-209ENST00000467326 IL34Q6ZMJ4 242 aa2.53□□□□□ -2
VPS50-209ENST00000467326 Q6ZS49 121 aa2.53□□□□□ -2
VPS50-209ENST00000467326 ZNF429Q86V71 674 aa2.53□□□□□ -2
VPS50-209ENST00000467326 ORMDL3Q8N138 153 aa2.53□□□□□ -2
VPS50-209ENST00000467326 TMEM86AQ8N2M4 240 aa2.53□□□□□ -2
VPS50-209ENST00000467326 ZNF645Q8N7E2 425 aa2.53□□□□□ -2
VPS50-209ENST00000467326 YIPF7Q8N8F6 280 aa2.53□□□□□ -2
VPS50-209ENST00000467326 OR2M3Q8NG83 312 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms