RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 TPM1P09493 284 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 CXCL2P19875 107 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 CXCL3P19876 107 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 ELOBQ15370 118 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 DNAL1Q4LDG9 190 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 OR10D3Q8NH80 312 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 OR5AK3PQ8NH89 298 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 RBP7Q96R05 134 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 TMEM109Q9BVC6 243 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 ABCC12Q96J65 1359 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 FLT4P35916 1363 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 TRAPPC13A5PLN9 417 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 ATP6V1G2O95670 118 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 MT-CO2P00403 227 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 PPBPP02775 128 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 AP1S1P61966 158 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 FABP5Q01469 135 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 DEFB115Q30KQ5 88 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 SAPCD1Q5SSQ6 148 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 AADACL4Q5VUY2 407 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 RASSF6Q6ZTQ3 369 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 SPATA24Q86W54 205 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 GPHB5Q86YW7 130 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 BOD1L2Q8IYS8 172 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 RIBC1Q8N443 379 aaPredicted RBP0.63□□□□□ -2.31
SMC4-207ENST00000467263 SPERTQ8NA61 448 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 RAB2BQ8WUD1 216 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 ZNHIT6Q9NWK9 470 aaKnown RBP0.63□□□□□ -2.31
SMC4-207ENST00000467263 C1orf109Q9NX04 203 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 NAT8Q9UHE5 227 aa0.63□□□□□ -2.31
SMC4-207ENST00000467263 TMED7-TICAM2A0A0A6YYA0 188 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 SMLR1H3BR10 107 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 HCRTO43612 131 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 TFPTP0C1Z6 253 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 MIPP30301 263 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 ETV1P50549 477 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 RAB14P61106 215 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 SLAMF1Q13291 335 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 HLA-DRB5Q30154 266 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 C17orf78Q8N4C9 275 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 C9orf163Q8N9P6 203 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 ZNF75CPQ92670 426 aaPredicted RBP0.62□□□□□ -2.31
SMC4-207ENST00000467263 NSRP1Q9H0G5 558 aaKnown RBP0.62□□□□□ -2.31
SMC4-207ENST00000467263 MED12LQ86YW9 2145 aa0.62□□□□□ -2.31
SMC4-207ENST00000467263 HEATR5AQ86XA9 2040 aa0.61□□□□□ -2.31
SMC4-207ENST00000467263 ZNF879B4DU55 563 aa0.61□□□□□ -2.31
SMC4-207ENST00000467263 TRGC1P0CF51 173 aa0.61□□□□□ -2.31
SMC4-207ENST00000467263 ALDH3A1P30838 453 aa0.61□□□□□ -2.31
SMC4-207ENST00000467263 FKBP1AP62942 108 aaKnown RBP0.61□□□□□ -2.31
SMC4-207ENST00000467263 TMEM86AQ8N2M4 240 aa0.61□□□□□ -2.31
SMC4-207ENST00000467263 SCAF11Q99590 1463 aaKnown RBP0.61□□□□□ -2.31
SMC4-207ENST00000467263 TMEM269A0A1B0GVZ9 245 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 MEIS3P1A6NDR6 274 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 MKRN2OSH3BPM6 223 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 SLCO1A2P46721 670 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 HIST1H4AP62805 103 aaKnown RBP0.6□□□□□ -2.31
SMC4-207ENST00000467263 HLA-DRB3P79483 266 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 JOSD1Q15040 202 aaPredicted RBP0.6□□□□□ -2.31
SMC4-207ENST00000467263 LRRC26Q2I0M4 334 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 ACSM3Q53FZ2 586 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 C9orf64Q5T6V5 341 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 CRLF3Q8IUI8 442 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 LFNGQ8NES3 379 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 SLC37A2Q8TED4 501 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 TIPINQ9BVW5 301 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 REG4Q9BYZ8 158 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 CHST6Q9GZX3 395 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 CHMP5Q9NZZ3 219 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 NUP160Q12769 1436 aa0.6□□□□□ -2.31
SMC4-207ENST00000467263 A0A1W2PP64 1363 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 RIMS2Q9UQ26 1411 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 OR51F1A6NGY5 319 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 CCRL2O00421 344 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 REG1BP48304 166 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 EVX1P49640 407 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 CLDN12P56749 244 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 AKR1C1Q04828 323 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 GID4Q8IVV7 300 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 DYNAPQ8N1N2 210 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 RPP25LQ8N5L8 163 aaKnown RBP0.59□□□□□ -2.31
SMC4-207ENST00000467263 OR5L1Q8NGL2 311 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 ACOT12Q8WYK0 555 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 TESCQ96BS2 214 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 C19orf60Q96EN9 201 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 TP53TG1Q9Y2A0 90 aa0.59□□□□□ -2.31
SMC4-207ENST00000467263 LRPPRCP42704 1394 aaKnown RBP0.58□□□□□ -2.32
SMC4-207ENST00000467263 C5orf49A4QMS7 147 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 IBA57-AS1B1ANH7 110 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 F8VZ95 297 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 ATP8B1O43520 1251 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 STX10O60499 249 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 NPPAP01160 153 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 CCL5P13501 91 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 RPS24P62847 133 aaKnown RBP0.58□□□□□ -2.32
SMC4-207ENST00000467263 RPL30P62888 115 aaKnown RBP0.58□□□□□ -2.32
SMC4-207ENST00000467263 PLPPR5Q32ZL2 321 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 FAM27BQ5VT28 67 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 DCXRQ7Z4W1 244 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 UMODL1-AS1Q8N2C9 162 aa0.58□□□□□ -2.32
SMC4-207ENST00000467263 TREM1Q9NP99 234 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms