RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 STPG2Q8N412 459 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 SGMS2Q8NHU3 365 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 PGLYRP1O75594 196 aaPredicted RBP7.45□□□□□ -1.22
HPS4-209ENST00000466781 RCC1P18754 421 aaPredicted RBP7.45□□□□□ -1.22
HPS4-209ENST00000466781 SRXN1Q9BYN0 137 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 C7orf71A4D174 169 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 FBLL1A6NHQ2 334 aaKnown RBP7.45□□□□□ -1.22
HPS4-209ENST00000466781 FSTP19883 344 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 EMP1P54849 157 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 ZNF146Q15072 292 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 TCF24Q7RTU0 167 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 MRPL32Q9BYC8 188 aaKnown RBP7.45□□□□□ -1.22
HPS4-209ENST00000466781 DLL3Q9NYJ7 618 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 HSPE1P61604 102 aaKnown RBP7.45□□□□□ -1.22
HPS4-209ENST00000466781 SNAI3Q3KNW1 292 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 SAXO1Q8IYX7 474 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 NRIP2Q9BQI9 281 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 WNT5BQ9H1J7 359 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 C8orf88P0DMB2 117 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 SPATA45Q537H7 98 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 TMEM183AQ8IXX5 376 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 C1orf162Q8NEQ5 155 aaPredicted RBP7.45□□□□□ -1.22
HPS4-209ENST00000466781 MEGF10Q96KG7 1140 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 TXNDC17Q9BRA2 123 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 TMEM70Q9BUB7 260 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 TMEM222Q9H0R3 208 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 V9GYH0 126 aa7.45□□□□□ -1.22
HPS4-209ENST00000466781 IGHV3-66A0A0C4DH42 116 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 ERGP11308 486 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 ASIPP42127 132 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 OR51G1Q8NGK1 321 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 LINC01587Q99440 93 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 IL4P05112 153 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 COX5BP10606 129 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 RUNX1Q01196 453 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 MBNL2Q5VZF2 373 aaKnown RBP7.44□□□□□ -1.22
HPS4-209ENST00000466781 SELENOHQ8IZQ5 122 aaKnown RBP7.44□□□□□ -1.22
HPS4-209ENST00000466781 AKIRIN1Q9H9L7 192 aaPredicted RBP7.44□□□□□ -1.22
HPS4-209ENST00000466781 MALP21145 153 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 VAX1Q5SQQ9 334 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 RTN4RL2Q86UN3 420 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 UBE2DNLQ8IWF7 75 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 RHOVQ96L33 236 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 ZSWIM8A7E2V4 1837 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 ARL14EPLP0DKL9 152 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 TDGF1P13385 188 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 PTGDSP41222 190 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 ZNF345Q14585 488 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 BEND2Q8NDZ0 799 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 PRELID3AQ96N28 172 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 HS3ST3B1Q9Y662 390 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 TSPAN13O95857 204 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 HLA-DQA1P01909 254 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 PKIAP61925 76 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 PRSS53Q2L4Q9 553 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 PEAR1Q5VY43 1037 aaPredicted RBP7.44□□□□□ -1.22
HPS4-209ENST00000466781 TMEM136Q6ZRR5 245 aa7.44□□□□□ -1.22
HPS4-209ENST00000466781 SRCAPQ6ZRS2 3230 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 CD1AP06126 327 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 STHQ8IWL8 128 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 FGFRL1Q8N441 504 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 OR11H7Q8NGC8 314 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 MARVELD3Q96A59 401 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 VWCEQ96DN2 955 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 SH3BGRL3Q9H299 93 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 TMEM106BQ9NUM4 274 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 TRBV20OR9-2A0A075B6H5 130 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 H3BRM9 83 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 LEPROTL1O95214 131 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 PTPRFP10586 1907 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 ABLIM2Q6H8Q1 611 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 PPP1R27Q86WC6 154 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 CBLN2Q8IUK8 224 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 C10orf111Q8N326 155 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 FDCSPQ8NFU4 85 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 TRGV2A0A075B6R0 118 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 FAM90A26D6RGX4 464 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 UNC119Q13432 240 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 GPR146Q96CH1 333 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 VGLL1Q99990 258 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 SDK1Q7Z5N4 2213 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 RBMY1BA6NDE4 496 aaKnown RBP7.43□□□□□ -1.22
HPS4-209ENST00000466781 RBMY1EA6NEQ0 496 aaKnown RBP7.43□□□□□ -1.22
HPS4-209ENST00000466781 MARCH11A6NNE9 402 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 H3BTX0 84 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 IGKV1D-33P01593 117 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 IGKV1-33P01594 117 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 RBMY1DP0C7P1 496 aaKnown RBP7.43□□□□□ -1.22
HPS4-209ENST00000466781 RBMY1A1P0DJD3 496 aaKnown RBP7.43□□□□□ -1.22
HPS4-209ENST00000466781 RBMY1CP0DJD4 496 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 NRN1LQ496H8 165 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 CYB561D1Q8N8Q1 229 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 OR10AG1Q8NH19 301 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 TAF15Q92804 592 aaKnown RBP eCLIP7.43□□□□□ -1.22
HPS4-209ENST00000466781 C19orf24Q9BVV8 132 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 C7orf69Q9H7B7 122 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 BEX4Q9NWD9 120 aaPredicted RBP7.43□□□□□ -1.22
HPS4-209ENST00000466781 SEMA5BQ9P283 1151 aa7.43□□□□□ -1.22
HPS4-209ENST00000466781 ATG2BQ96BY7 2078 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms