RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 ING4Q9UNL4 249 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 PKHD1P08F94 4074 aa10.94□□□□□ -0.66
CXCR4-203ENST00000466288 A0A1W2PP11 408 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 ANKRD34BA5PLL1 514 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 SULT1C2O00338 296 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 HLA-DMAP28067 261 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 HTR2CP28335 458 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 BDKRB2P30411 391 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 OR3A3P47888 321 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 MECP2P51608 486 aaKnown RBP10.93□□□□□ -0.66
CXCR4-203ENST00000466288 C6orf183Q5T699 404 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 RAB12Q6IQ22 244 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 TOMM5Q8N4H5 51 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 FCAMRQ8WWV6 532 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 FAM3DQ96BQ1 224 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 SLC25A38Q96DW6 304 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 TAS2R4Q9NYW5 299 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 FAT2Q9NYQ8 4349 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 ABCA13Q86UQ4 5058 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 SAA2-SAA4A0A096LPE2 208 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 SAA2P0DJI9 122 aaPredicted RBP10.93□□□□□ -0.66
CXCR4-203ENST00000466288 SERPINA2P20848 420 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 CD81P60033 236 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 MOGAT2Q3SYC2 334 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 TMEM69Q5SWH9 247 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 C5orf24Q7Z6I8 188 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 AKAP14Q86UN6 197 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 OR52L2PQ8NGH6 319 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 TAF9BQ9HBM6 251 aa10.93□□□□□ -0.66
CXCR4-203ENST00000466288 RBMX2Q9Y388 322 aaKnown RBP10.93□□□□□ -0.66
CXCR4-203ENST00000466288 DNAH2Q9P225 4427 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 DYNC1H1Q14204 4646 aaKnown RBP10.92□□□□□ -0.66
CXCR4-203ENST00000466288 CNIH1O95406 144 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 PPP1CCP36873 323 aaKnown RBP10.92□□□□□ -0.66
CXCR4-203ENST00000466288 PLGLAQ15195 96 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 C2orf76Q3KRA6 126 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 TRAT1Q6PIZ9 186 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 ZNF562Q6V9R5 426 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 DEFB125Q8N687 156 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 SCPEP1Q9HB40 452 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 GHRLQ9UBU3 117 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 JPT1Q9UK76 154 aa10.92□□□□□ -0.66
CXCR4-203ENST00000466288 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 METTL21EPA6NDL7 271 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 HMX3A6NHT5 357 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 MCRIP1C9JLW8 97 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 BPNT1O95861 308 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 DHFRP00374 187 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 CD7P09564 240 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 UBBP0CG47 229 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 FAUP35544 74 aaKnown RBP10.91□□□□□ -0.66
CXCR4-203ENST00000466288 PMS2P11Q13670 270 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 GPR176Q14439 515 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 OR2K2Q8NGT1 345 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 GATAD1Q8WUU5 269 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 ORAI1Q96D31 301 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 MRPS24Q96EL2 167 aaKnown RBP10.91□□□□□ -0.66
CXCR4-203ENST00000466288 CYYR1Q96J86 154 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 CLCC1Q96S66 551 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 WFDC10AQ9H1F0 79 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 SPACA1Q9HBV2 294 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 MBNL3Q9NUK0 354 aaKnown RBP10.91□□□□□ -0.66
CXCR4-203ENST00000466288 RAB22AQ9UL26 194 aa10.91□□□□□ -0.66
CXCR4-203ENST00000466288 MRPS7Q9Y2R9 242 aaKnown RBP10.91□□□□□ -0.66
CXCR4-203ENST00000466288 A0A0B4J203 849 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 A0A0G2JLM5 398 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 CXorf65A6NEN9 183 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 NUPR2A6NF83 97 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 YPEL1O60688 119 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 ZNF780AO75290 641 aaPredicted RBP10.9□□□□□ -0.66
CXCR4-203ENST00000466288 TRBV12-3P01733 135 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 GTF2F2P13984 249 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 ZNF93P35789 620 aaPredicted RBP10.9□□□□□ -0.66
CXCR4-203ENST00000466288 TAS2R20P59543 309 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 KLF9Q13886 244 aaPredicted RBP10.9□□□□□ -0.66
CXCR4-203ENST00000466288 SLC22A6Q4U2R8 563 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 LY6G6FQ5SQ64 297 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 NEDD4LQ96PU5 975 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 YPEL2Q96QA6 119 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 IFI27L2Q9H2X8 130 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 SRD5A3Q9H8P0 318 aa10.9□□□□□ -0.66
CXCR4-203ENST00000466288 LINC00854A0A1B0GVQ3 168 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 ZNF785A8K8V0 405 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 H3BUA1 57 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 DEDDO75618 318 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 RBBP9O75884 186 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 CA2P00918 260 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 CT45A6P0DMU7 189 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 CT45A5P0DMU8 189 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 CT45A7P0DMV0 189 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 CLDN12P56749 244 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 HTD2P86397 168 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 FAM71F2Q6NXP2 309 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 S100A13Q99584 98 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 ZNF355PQ9NSJ1 428 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 SLC2A8Q9NY64 477 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 SLC23A1Q9UHI7 598 aa10.89□□□□□ -0.67
CXCR4-203ENST00000466288 ANKRD20A5PA0PJZ0 165 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 OR11H12B2RN74 326 aa10.88□□□□□ -0.67
CXCR4-203ENST00000466288 INMT-MINDY4F8WBC2 141 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms