RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 DRAM1Q8N682 238 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 FBXL15Q9H469 300 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 THADAQ6YHU6 1953 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 AREGP15514 252 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 CXCL2P19875 107 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 COLCA1Q6ZS62 124 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 C5orf66Q9H5L9 145 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 SEMA5BQ9P283 1151 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 MPDU1O75352 247 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 HKR1P10072 659 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 H1FOOQ8IZA3 346 aaPredicted RBP10.86□□□□□ -0.67
NUP58-206ENST00000463407 NRIP2Q9BQI9 281 aa10.86□□□□□ -0.67
NUP58-206ENST00000463407 LYNX1G3V0Z9 82 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 KBTBD11O94819 623 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 IGKV3-20P01619 116 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 IGHV3-48P01763 117 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 MELTFP08582 738 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 LYNX1P0DP58 116 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 CRISP2P16562 243 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 SMAGPQ0VAQ4 97 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 ZNF146Q15072 292 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 THSD7BQ9C0I4 1608 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 PRB3Q04118 309 aaPredicted RBP10.85□□□□□ -0.67
NUP58-206ENST00000463407 SRSF6Q13247 344 aaKnown RBP10.85□□□□□ -0.67
NUP58-206ENST00000463407 SLC16A13Q7RTY0 426 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 GREB1Q4ZG55 1949 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 PGPA6NDG6 321 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 TNFRSF9Q07011 255 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 FOXF2Q12947 444 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 PPP1R27Q86WC6 154 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 IGHV1-18A0A0C4DH31 117 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 APCSP02743 223 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 ZCCHC24Q8N2G6 241 aaKnown RBP10.85□□□□□ -0.67
NUP58-206ENST00000463407 OR10C1Q96KK4 312 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 LYRM2Q9NU23 88 aaPredicted RBP10.85□□□□□ -0.67
NUP58-206ENST00000463407 AP5S1Q9NUS5 200 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 VDAC2P45880 294 aaPredicted RBP10.85□□□□□ -0.67
NUP58-206ENST00000463407 TCF19Q9Y242 345 aa10.85□□□□□ -0.67
NUP58-206ENST00000463407 HERVK_113P61574 105 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 CHAC2Q8WUX2 184 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 ADAM11O75078 769 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 C1QL2Q7Z5L3 287 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 STPG2Q8N412 459 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 ZIC4Q8N9L1 334 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 MYOZ3Q8TDC0 251 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 MSRB2Q9Y3D2 182 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 S4R3C0 116 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 PIKFYVEQ9Y2I7 2098 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 ISLRO14498 428 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 ZNF253O75346 499 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 IER3P46695 156 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 AMMECR1LQ6DCA0 310 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 LAIR2Q6ISS4 152 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 ZNF841Q6ZN19 808 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 IGHV3-66A0A0C4DH42 116 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 KBTBD11-OT1A0A1B0GTJ5 212 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 TSPOP30536 169 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 MAS1LP35410 378 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 OR13A1Q8NGR1 328 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 DNAJC4Q9NNZ3 241 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 CFDP00746 253 aaPredicted RBP10.84□□□□□ -0.67
NUP58-206ENST00000463407 GPX1P07203 203 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 BCL2P10415 239 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 MEF2CQ06413 473 aaPredicted RBP10.84□□□□□ -0.67
NUP58-206ENST00000463407 TMEM187Q14656 261 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 COX19Q49B96 90 aa10.84□□□□□ -0.67
NUP58-206ENST00000463407 IGHV3OR16-13A0A075B7E8 117 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 IGHV3-74A0A0B4J1X5 117 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 FAM90A26D6RGX4 464 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 VAMP3Q15836 100 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 REPIN1Q9BWE0 567 aaKnown RBP10.83□□□□□ -0.68
NUP58-206ENST00000463407 HSPB7Q9UBY9 170 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 LOC389332A0A1B0GUA5 103 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 C12orf77C9JDV5 145 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 A0A0G2JLM5 398 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 DCAF16Q9NXF7 216 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 NEUROG3Q9Y4Z2 214 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 C7orf77A4D0Y5 90 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 TIMP3P35625 211 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 TAF15Q92804 592 aaKnown RBP eCLIP10.83□□□□□ -0.68
NUP58-206ENST00000463407 FBXL7Q9UJT9 491 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 ZNF207O43670 478 aaKnown RBP10.83□□□□□ -0.68
NUP58-206ENST00000463407 TMEM183BQ1AE95 376 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 WFIKKN1Q96NZ8 548 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 FUT9Q9Y231 359 aa10.83□□□□□ -0.68
NUP58-206ENST00000463407 MOSP00540 346 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 LRP11Q86VZ4 500 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 FAM90A1Q86YD7 464 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 ARPC1AQ92747 370 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
NUP58-206ENST00000463407 IGLV3-32A0A0A0MS00 114 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 IL4P05112 153 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 CX3CL1P78423 397 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 NPIPB3Q92617 1050 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 MAP1LC3CQ9BXW4 147 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 LINC00312Q9Y6C7 94 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 ZSWIM8A7E2V4 1837 aa10.82□□□□□ -0.68
NUP58-206ENST00000463407 CCDC88CQ9P219 2028 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms