RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 LILRB2Q8N423 598 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 TANC2Q9HCD6 1990 aa10.48□□□□□ -0.73
VAPB-203ENST00000463370 MYOD1P15172 320 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 GNLYP22749 145 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 REG1BP48304 166 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 THBS3P49746 956 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 AARDQ4LEZ3 155 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 SLC25A24Q6NUK1 477 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 C11orf42Q8N5U0 333 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 OR4S2Q8NH73 311 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 GNPNAT1Q96EK6 184 aaPredicted RBP10.47□□□□□ -0.73
VAPB-203ENST00000463370 VSIRQ9H7M9 311 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 STRAPQ9Y3F4 350 aaKnown RBP10.47□□□□□ -0.73
VAPB-203ENST00000463370 UBE2L5PA0A1B0GUS4 154 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 SRRM4A7MD48 611 aaKnown RBP10.47□□□□□ -0.73
VAPB-203ENST00000463370 PPIHO43447 177 aaKnown RBP10.47□□□□□ -0.73
VAPB-203ENST00000463370 IFNA5P01569 189 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 IFNA17P01571 189 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 RHOVQ96L33 236 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 IGSF10Q6WRI0 2623 aa10.47□□□□□ -0.73
VAPB-203ENST00000463370 F8W036 122 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 TRIM77I1YAP6 450 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 NUPL2O15504 423 aaKnown RBP10.46□□□□□ -0.73
VAPB-203ENST00000463370 DAOP14920 347 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 KIR2DS2P43631 304 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 ERVK-16P61578 105 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 HBG1P69891 147 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 HBG2P69892 147 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 LRRC75BQ2VPJ9 315 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 TMEM155Q4W5P6 130 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 OR4A47Q6IF82 309 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 SPSB3Q6PJ21 355 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 ZNF841Q6ZN19 808 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 OR4A16Q8NH70 328 aa10.46□□□□□ -0.73
VAPB-203ENST00000463370 MRPL20Q9BYC9 149 aaKnown RBP10.46□□□□□ -0.73
VAPB-203ENST00000463370 SPTBN1Q01082 2364 aaKnown RBP10.46□□□□□ -0.74
VAPB-203ENST00000463370 C15orf62A8K5M9 175 aa10.46□□□□□ -0.74
VAPB-203ENST00000463370 HAX1O00165 279 aa10.46□□□□□ -0.74
VAPB-203ENST00000463370 EIF3GO75821 320 aaKnown RBP eCLIP10.46□□□□□ -0.74
VAPB-203ENST00000463370 IGHV2-70P01814 119 aa10.46□□□□□ -0.74
VAPB-203ENST00000463370 SFTA3P0C7M3 94 aa10.46□□□□□ -0.74
VAPB-203ENST00000463370 TMEM30BQ3MIR4 351 aa10.46□□□□□ -0.74
VAPB-203ENST00000463370 C10orf91Q5T1B1 145 aa10.46□□□□□ -0.74
VAPB-203ENST00000463370 ZNF833PQ6ZTB9 187 aa10.46□□□□□ -0.74
VAPB-203ENST00000463370 PUSL1Q8N0Z8 303 aaKnown RBP10.46□□□□□ -0.74
VAPB-203ENST00000463370 WDR61Q9GZS3 305 aaKnown RBP10.46□□□□□ -0.74
VAPB-203ENST00000463370 VPS13CQ709C8 3753 aa10.46□□□□□ -0.74
VAPB-203ENST00000463370 YLPM1P49750 1951 aaKnown RBP10.46□□□□□ -0.74
VAPB-203ENST00000463370 UMAD1C9J7I0 102 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 PPOXP50336 477 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 DVL1P1P54792 670 aaPredicted RBP10.45□□□□□ -0.74
VAPB-203ENST00000463370 OR10A7Q8NGE5 316 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 ACACBO00763 2458 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 FAM90A9PA6NNJ1 464 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 M6PRP20645 277 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 GUK1Q16774 197 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 AKR1C8PQ5T2L2 129 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 SP5Q6BEB4 398 aaPredicted RBP10.45□□□□□ -0.74
VAPB-203ENST00000463370 C11orf71Q6IPW1 123 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 SSX7Q7RTT5 188 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 SUN5Q8TC36 379 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 SCGB1C1Q8TD33 95 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 TMEM170AQ8WVE7 144 aa10.45□□□□□ -0.74
VAPB-203ENST00000463370 ITLN2Q8WWU7 325 aaPredicted RBP10.45□□□□□ -0.74
VAPB-203ENST00000463370 C15orf61A6NNL5 157 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 C19orf84I3L1E1 186 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 NDUFA2O43678 99 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 VDAC2P45880 294 aaPredicted RBP10.44□□□□□ -0.74
VAPB-203ENST00000463370 SPCS3P61009 180 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 OR13D1Q8NGV5 346 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 TAF15Q92804 592 aaKnown RBP eCLIP10.44□□□□□ -0.74
VAPB-203ENST00000463370 CIB3Q96Q77 187 aaPredicted RBP10.44□□□□□ -0.74
VAPB-203ENST00000463370 RARRES2Q99969 163 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 RPRMQ9NS64 109 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 SLC35D1Q9NTN3 355 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 J3QR06 171 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 RRHO14718 337 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 ARG1P05089 322 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 H2AFB1P0C5Y9 115 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 IGHV1-8P0DP01 117 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 PPT1P50897 306 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 ZNF726P1Q15940 193 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 ABHD12Q8N2K0 398 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 ADTRPQ96IZ2 230 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 EIF5A2Q9GZV4 153 aaKnown RBP10.44□□□□□ -0.74
VAPB-203ENST00000463370 CBLN4Q9NTU7 201 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 TCF19Q9Y242 345 aa10.44□□□□□ -0.74
VAPB-203ENST00000463370 CARHSP1Q9Y2V2 147 aaKnown RBP10.44□□□□□ -0.74
VAPB-203ENST00000463370 DOCK11Q5JSL3 2073 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 FAM74A7A6NL05 159 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 OPN1MWP04001 364 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 OPN1MW2P0DN77 364 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 OPN1MW3P0DN78 364 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 FAM74A3Q4VXF1 159 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 ZNF429Q86V71 674 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 OR10P1Q8NGE3 313 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 OR10X1Q8NGY0 326 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 SFT2D1Q8WV19 159 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 SEC11CQ9BY50 192 aa10.43□□□□□ -0.74
VAPB-203ENST00000463370 NKX6-2Q9C056 277 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms