RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 TMEM74BQ9NUR3 256 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 A0A1W2PS18 150 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 IL4P05112 153 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 MRPS18AQ9NVS2 196 aaKnown RBP16.78■□□□□ 0.28
SNX27-204ENST00000458013 TRBV20OR9-2A0A075B6H5 130 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 PRR33A8MZF0 331 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 PROB1E7EW31 1015 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 COX6CP09669 75 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 TRPM6Q9BX84 2022 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 C5orf67F2Z3F1 127 aa16.77■□□□□ 0.28
SNX27-204ENST00000458013 M0R381 172 aa16.77■□□□□ 0.28
SNX27-204ENST00000458013 ISG15P05161 165 aa16.77■□□□□ 0.28
SNX27-204ENST00000458013 FSTP19883 344 aa16.77■□□□□ 0.28
SNX27-204ENST00000458013 TMPRSS3P57727 454 aa16.77■□□□□ 0.28
SNX27-204ENST00000458013 OTOFQ9HC10 1997 aa16.77■□□□□ 0.28
SNX27-204ENST00000458013 ANKRD31Q8N7Z5 1873 aa16.77■□□□□ 0.28
SNX27-204ENST00000458013 WFDC12Q8WWY7 111 aa16.77■□□□□ 0.28
SNX27-204ENST00000458013 DDA1Q9BW61 102 aa16.77■□□□□ 0.28
SNX27-204ENST00000458013 PF4P02776 101 aa16.77■□□□□ 0.27
SNX27-204ENST00000458013 HTN3P15516 51 aa16.77■□□□□ 0.27
SNX27-204ENST00000458013 PRR31Q5SQ13 230 aa16.77■□□□□ 0.27
SNX27-204ENST00000458013 FGF11Q92914 225 aa16.77■□□□□ 0.27
SNX27-204ENST00000458013 TRIP12Q14669 1992 aaPredicted RBP16.77■□□□□ 0.27
SNX27-204ENST00000458013 CENPWQ5EE01 88 aa16.77■□□□□ 0.27
SNX27-204ENST00000458013 MARS2Q96GW9 593 aaKnown RBP16.77■□□□□ 0.27
SNX27-204ENST00000458013 SUMO2P61956 95 aaKnown RBP16.76■□□□□ 0.27
SNX27-204ENST00000458013 TMEM187Q14656 261 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 GLMPQ8WWB7 406 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 NHSL1Q5SYE7 1610 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 CA11O75493 328 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 CACNG7P62955 275 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 PET117Q6UWS5 81 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 C14orf144Q96I85 54 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 PRR19A6NJB7 356 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 RNASE4P34096 147 aaKnown RBP16.76■□□□□ 0.27
SNX27-204ENST00000458013 TTC32Q5I0X7 151 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 MC5RP33032 325 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 TMEM170BQ5T4T1 132 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 DEFB104AQ8WTQ1 72 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 ITLN2Q8WWU7 325 aaPredicted RBP16.76■□□□□ 0.27
SNX27-204ENST00000458013 TDRD15B5MCY1 1934 aaKnown RBP16.76■□□□□ 0.27
SNX27-204ENST00000458013 IGHV1-69-2A0A0G2JMI3 117 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 K7ERU9 68 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 KLF4O43474 513 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 NDUFA3O95167 84 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 CTSSP25774 331 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 ASPHD2Q6ICH7 369 aa16.76■□□□□ 0.27
SNX27-204ENST00000458013 LHFPL5Q8TAF8 219 aa16.75■□□□□ 0.27
SNX27-204ENST00000458013 GEMIN7Q9H840 131 aaKnown RBP16.75■□□□□ 0.27
SNX27-204ENST00000458013 RAMP1O60894 148 aa16.75■□□□□ 0.27
SNX27-204ENST00000458013 NABP2Q9BQ15 211 aa16.75■□□□□ 0.27
SNX27-204ENST00000458013 SHANK3Q9BYB0 1731 aa16.75■□□□□ 0.27
SNX27-204ENST00000458013 FOXA2Q9Y261 457 aaPredicted RBP16.75■□□□□ 0.27
SNX27-204ENST00000458013 ICAM4Q14773 271 aa16.75■□□□□ 0.27
SNX27-204ENST00000458013 PCSK4Q6UW60 755 aa16.75■□□□□ 0.27
SNX27-204ENST00000458013 C1QL2Q7Z5L3 287 aa16.75■□□□□ 0.27
SNX27-204ENST00000458013 RFPL3SP0C7P2 107 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 C8orf88P0DMB2 117 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 FOLR2P14207 255 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 CTAG1AP78358 180 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 DRAM1Q8N682 238 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 LAMB2P55268 1798 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 IGKV1D-42A0A075B6H8 117 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 WISP3O95389 354 aaPredicted RBP16.74■□□□□ 0.27
SNX27-204ENST00000458013 CGAP01215 116 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 HOXD4P09016 255 aaPredicted RBP16.74■□□□□ 0.27
SNX27-204ENST00000458013 CDC42EP3Q9UKI2 254 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 QSER1Q2KHR3 1735 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 MMD2Q8IY49 270 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 CD69Q07108 199 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 FAM106AQ4KMX7 169 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 SLC25A34Q6PIV7 304 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 NUP214P35658 2090 aaPredicted RBP16.74■□□□□ 0.27
SNX27-204ENST00000458013 COL4A1P02462 1669 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 C7orf66A4D0T2 115 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 NINQ8N4C6 2090 aa16.74■□□□□ 0.27
SNX27-204ENST00000458013 SCO2A0A1W2PP80 73 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 GATA2P23769 480 aaPredicted RBP16.73■□□□□ 0.27
SNX27-204ENST00000458013 HS3ST3B1Q9Y662 390 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 SHISA5Q8N114 240 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 EEF1AKMT3Q96AZ1 226 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 SIGLEC12Q96PQ1 595 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 A0A0G2JMM0 328 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 A0A1W2PPB8 328 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 A0A1W2PRS3 328 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 KIR3DP1A8MWS1 328 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 SFTA2Q6UW10 78 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 SCN2AQ99250 2005 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 DDTP30046 118 aa16.73■□□□□ 0.27
SNX27-204ENST00000458013 TRGV3P03979 118 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 TCF19Q9Y242 345 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 SOX21Q9Y651 276 aaPredicted RBP16.72■□□□□ 0.27
SNX27-204ENST00000458013 IL6RP08887 468 aaPredicted RBP16.72■□□□□ 0.27
SNX27-204ENST00000458013 OR51G1Q8NGK1 321 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 UQCR10Q9UDW1 63 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 A0A0B4J293 547 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 MPTX1A8MV57 137 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 IGFBP2P18065 325 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 GCHFRP30047 84 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 HSPE1P61604 102 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms