RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 FGF11Q92914 225 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 DIRC2Q96SL1 478 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 MRPL13Q9BYD1 178 aaKnown RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SPANXCQ9NY87 97 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 ARID2Q68CP9 1835 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF638Q14966 1978 aaKnown RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 MS4A18H0YCH9 400 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF205O95201 554 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 AREGP15514 252 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 PEBP1P30086 187 aaKnown RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 TM4SF4P48230 202 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SMAGPQ0VAQ4 97 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 FXYD3Q14802 87 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 ODF1Q14990 250 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 MS4A18Q3C1V0 323 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 C10orf128Q5T292 105 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SP7Q8TDD2 431 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 RND1Q92730 232 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 EAF1Q96JC9 268 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 REPIN1Q9BWE0 567 aaKnown RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SMPXQ9UHP9 88 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 A0A0G2JMM0 328 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 KIR2DL5BA0A0G2JN68 375 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 KIR2DL5BA0A0G2JPC4 375 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 A0A1W2PPB8 328 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 ZNF785A8K8V0 405 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 KIR3DP1A8MWS1 328 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 H0Y8X5 98 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 RBP4P02753 201 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 TNFRSF1AP19438 455 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 SAMD5Q5TGI4 173 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 ZFAND6Q6FIF0 208 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 KIR2DL5AQ8N109 375 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 LYPD6BQ8NI32 183 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 RAB1CQ92928 201 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 PRDM14Q9GZV8 571 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 FNDC4Q9H6D8 234 aaPredicted RBP4.28□□□□□ -1.72
PCDH9-203ENST00000456367 HIGD1AQ9Y241 93 aa4.28□□□□□ -1.72
PCDH9-203ENST00000456367 RBBP6Q7Z6E9 1792 aaKnown RBP4.28□□□□□ -1.73
PCDH9-203ENST00000456367 ANKRD36A6QL64 1941 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 A0A1W2PRE2 83 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 PPIAL4DF5H284 164 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 J3QW42 95 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 DRD3P35462 400 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 ERVK11-1P61568 191 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 GNB2P62879 340 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF146Q15072 292 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 RBPMS2Q6ZRY4 209 aaKnown RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 LINC01551Q86U37 167 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 GCSAMQ8N6F7 178 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 TMEM52Q8NDY8 209 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 ZNF721Q8TF20 911 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 PGLYRP4Q96LB8 373 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 NABP2Q9BQ15 211 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 SERGEFQ9UGK8 458 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 PSME4Q14997 1843 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 A0A0G2JLM5 398 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 ODAMA1E959 279 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 FAM90A9PA6NNJ1 464 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 M0R3E3 92 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 GFERP55789 205 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 TMPRSS3P57727 454 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 HOXA4Q00056 320 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 GAGE13Q4V321 117 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 TEX43Q6ZNM6 134 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 PAQR4Q8N4S7 273 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 STPG3Q8N7X2 389 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 RFESDQ8TAC1 157 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 ABHD14AQ9BUJ0 271 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 RPP21Q9H633 154 aaKnown RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 WDR54Q9H977 334 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 WNT16Q9UBV4 365 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 A0A1W2PR80 420 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 PGPA6NDG6 321 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 PROB1E7EW31 1015 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 PPIHO43447 177 aaKnown RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 ZG16O60844 167 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 IL6RP08887 468 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 CTSSP25774 331 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 UCP2P55851 309 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 LGALS4P56470 323 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 LYZP61626 148 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 ZXDAP98168 799 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 PTCRAQ6ISU1 281 aaPredicted RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 ZADH2Q8N4Q0 377 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 CHRNA10Q9GZZ6 450 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 UBTD1Q9HAC8 227 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 GNB4Q9HAV0 340 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 A0A1B0GUT8 65 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 SCO2A0A1W2PP80 73 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 FAM181BA6NEQ2 426 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 SHISA8B8ZZ34 492 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 K7ESF4 209 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 SMAD7O15105 426 aaKnown RBP4.27□□□□□ -1.73
PCDH9-203ENST00000456367 TMPRSS2O15393 492 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 C3orf79P0CE67 100 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 IGLC2P0DOY2 106 aa4.27□□□□□ -1.73
PCDH9-203ENST00000456367 IGLC3P0DOY3 106 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms