RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 RNF183Q96D59 192 aa17.23■□□□□ 0.35
PTPRA-208ENST00000455631 ZNF257Q9Y2Q1 563 aa17.23■□□□□ 0.35
PTPRA-208ENST00000455631 BPNT1O95861 308 aa17.22■□□□□ 0.35
PTPRA-208ENST00000455631 SAA1P0DJI8 122 aaPredicted RBP17.22■□□□□ 0.35
PTPRA-208ENST00000455631 TPBGQ13641 420 aa17.22■□□□□ 0.35
PTPRA-208ENST00000455631 ZFP1Q6P2D0 407 aa17.22■□□□□ 0.35
PTPRA-208ENST00000455631 STPG3Q8N7X2 389 aa17.22■□□□□ 0.35
PTPRA-208ENST00000455631 OR4A4PQ8NGN8 299 aa17.22■□□□□ 0.35
PTPRA-208ENST00000455631 HSF4Q9ULV5 492 aa17.22■□□□□ 0.35
PTPRA-208ENST00000455631 RBM7Q9Y580 266 aaKnown RBP17.22■□□□□ 0.35
PTPRA-208ENST00000455631 TRAV25A0A0B4J276 109 aa17.21■□□□□ 0.35
PTPRA-208ENST00000455631 HMX3A6NHT5 357 aa17.21■□□□□ 0.35
PTPRA-208ENST00000455631 CD1AP06126 327 aa17.21■□□□□ 0.35
PTPRA-208ENST00000455631 CDK10Q15131 360 aa17.21■□□□□ 0.35
PTPRA-208ENST00000455631 MMD2Q8IY49 270 aa17.21■□□□□ 0.35
PTPRA-208ENST00000455631 SLC38A6Q8IZM9 456 aa17.21■□□□□ 0.35
PTPRA-208ENST00000455631 OR2C3Q8N628 320 aa17.21■□□□□ 0.35
PTPRA-208ENST00000455631 OR10J5Q8NHC4 309 aa17.21■□□□□ 0.35
PTPRA-208ENST00000455631 OSR1Q8TAX0 266 aaPredicted RBP17.21■□□□□ 0.35
PTPRA-208ENST00000455631 ARHGAP5-AS1Q96IT6 56 aa17.21■□□□□ 0.35
PTPRA-208ENST00000455631 FABP7O15540 132 aa17.2■□□□□ 0.34
PTPRA-208ENST00000455631 ATP5HO75947 161 aa17.2■□□□□ 0.34
PTPRA-208ENST00000455631 ACSM3Q53FZ2 586 aa17.2■□□□□ 0.34
PTPRA-208ENST00000455631 IGSF11Q5DX21 431 aa17.2■□□□□ 0.34
PTPRA-208ENST00000455631 OR6M1Q8NGM8 313 aa17.2■□□□□ 0.34
PTPRA-208ENST00000455631 ADTRPQ96IZ2 230 aa17.2■□□□□ 0.34
PTPRA-208ENST00000455631 PECRQ9BY49 303 aa17.2■□□□□ 0.34
PTPRA-208ENST00000455631 KIR2DL5BA0A0G2JN68 375 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 KIR2DL5BA0A0G2JPC4 375 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 DPPA5A6NC42 116 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 EFCAB10A6NFE3 127 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 FOXI3A8MTJ6 420 aaPredicted RBP17.19■□□□□ 0.34
PTPRA-208ENST00000455631 MYL12BO14950 172 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 RPL35AP18077 110 aaKnown RBP17.19■□□□□ 0.34
PTPRA-208ENST00000455631 DUTP33316 252 aaKnown RBP17.19■□□□□ 0.34
PTPRA-208ENST00000455631 ST3GAL4Q11206 333 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 P2RY14Q15391 338 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 ZNF585BQ52M93 769 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 KIR2DL5AQ8N109 375 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 FAM89BQ8N5H3 189 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 KIR2DL5BQ8NHK3 375 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 PHYHIPQ92561 330 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 EEF1AKMT3Q96AZ1 226 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 FBXL17Q9UF56 701 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 VPS13DQ5THJ4 4388 aa17.19■□□□□ 0.34
PTPRA-208ENST00000455631 LINC00473A8K010 186 aa17.18■□□□□ 0.34
PTPRA-208ENST00000455631 CTRB1P17538 263 aa17.18■□□□□ 0.34
PTPRA-208ENST00000455631 TMEM50BP56557 158 aa17.18■□□□□ 0.34
PTPRA-208ENST00000455631 WNT4P56705 351 aa17.18■□□□□ 0.34
PTPRA-208ENST00000455631 CTRB2Q6GPI1 263 aa17.18■□□□□ 0.34
PTPRA-208ENST00000455631 UNQ9165/PRO28630Q6UXU0 137 aa17.18■□□□□ 0.34
PTPRA-208ENST00000455631 MARC2Q969Z3 335 aa17.18■□□□□ 0.34
PTPRA-208ENST00000455631 SPAG8Q99932 426 aaPredicted RBP17.18■□□□□ 0.34
PTPRA-208ENST00000455631 DCUN1D5Q9BTE7 237 aa17.18■□□□□ 0.34
PTPRA-208ENST00000455631 CABLES2Q9BTV7 478 aa17.18■□□□□ 0.34
PTPRA-208ENST00000455631 NPIPB5A8MRT5 1133 aa17.17■□□□□ 0.34
PTPRA-208ENST00000455631 TEX22C9J3V5 150 aa17.17■□□□□ 0.34
PTPRA-208ENST00000455631 NANOS2P60321 138 aaKnown RBP17.17■□□□□ 0.34
PTPRA-208ENST00000455631 MRPS15P82914 257 aaKnown RBP17.17■□□□□ 0.34
PTPRA-208ENST00000455631 FYTTD1Q96QD9 318 aaKnown RBP17.17■□□□□ 0.34
PTPRA-208ENST00000455631 SMPD3Q9NY59 655 aaPredicted RBP17.17■□□□□ 0.34
PTPRA-208ENST00000455631 TRBV6-7A0A0A0MS04 114 aa17.16■□□□□ 0.34
PTPRA-208ENST00000455631 IFNA4P05014 189 aa17.16■□□□□ 0.34
PTPRA-208ENST00000455631 GSTT2P0CG29 244 aa17.16■□□□□ 0.34
PTPRA-208ENST00000455631 GSTT2BP0CG30 244 aa17.16■□□□□ 0.34
PTPRA-208ENST00000455631 FCGR2BP31994 310 aaPredicted RBP17.16■□□□□ 0.34
PTPRA-208ENST00000455631 RBMS2Q15434 407 aaKnown RBP17.16■□□□□ 0.34
PTPRA-208ENST00000455631 MED22Q15528 200 aa17.16■□□□□ 0.34
PTPRA-208ENST00000455631 FANCD2OSQ96PS1 177 aa17.16■□□□□ 0.34
PTPRA-208ENST00000455631 MRPL27Q9P0M9 148 aaKnown RBP17.16■□□□□ 0.34
PTPRA-208ENST00000455631 FCGR3BO75015 233 aa17.15■□□□□ 0.34
PTPRA-208ENST00000455631 C8orf88P0DMB2 117 aa17.15■□□□□ 0.34
PTPRA-208ENST00000455631 HSD17B12Q53GQ0 312 aa17.15■□□□□ 0.34
PTPRA-208ENST00000455631 PLAC9Q5JTB6 97 aa17.15■□□□□ 0.34
PTPRA-208ENST00000455631 C11orf45Q8TAV5 145 aa17.15■□□□□ 0.34
PTPRA-208ENST00000455631 GINS4Q9BRT9 223 aa17.15■□□□□ 0.34
PTPRA-208ENST00000455631 MFFQ9GZY8 342 aa17.15■□□□□ 0.34
PTPRA-208ENST00000455631 PLGRKTQ9HBL7 147 aa17.15■□□□□ 0.34
PTPRA-208ENST00000455631 RPL27AP46776 148 aaKnown RBP17.14■□□□□ 0.33
PTPRA-208ENST00000455631 ODF3L2Q3SX64 289 aa17.14■□□□□ 0.33
PTPRA-208ENST00000455631 VKORC1L1Q8N0U8 176 aa17.14■□□□□ 0.33
PTPRA-208ENST00000455631 SETD9Q8NE22 299 aa17.14■□□□□ 0.33
PTPRA-208ENST00000455631 C5orf66Q9H5L9 145 aa17.14■□□□□ 0.33
PTPRA-208ENST00000455631 IGHV3-35A0A0C4DH35 117 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 DHFRP00374 187 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 CLEC3BP05452 202 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 FCGR3AP08637 254 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 IL6RP08887 468 aaPredicted RBP17.13■□□□□ 0.33
PTPRA-208ENST00000455631 MED14OSP0DP75 135 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 AREGP15514 252 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 OR2B11Q5JQS5 317 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 MS4A15Q8N5U1 240 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 C2CD4CQ8TF44 421 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 MAFIPQ8WZ33 124 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 MAP6D1Q9H9H5 199 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 SLC2A9Q9NRM0 540 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 UFC1Q9Y3C8 167 aa17.13■□□□□ 0.33
PTPRA-208ENST00000455631 DNAH6Q9C0G6 4158 aa17.12■□□□□ 0.33
PTPRA-208ENST00000455631 MFSD2BA6NFX1 497 aa17.12■□□□□ 0.33
PTPRA-208ENST00000455631 E7EUB6 86 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms