RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 EPPINO95925 133 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 TGFAP01135 160 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 PFN1P07737 140 aaKnown RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 IGFBP3P17936 291 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 MDKP21741 143 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 GCHFRP30047 84 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 CAMPP49913 170 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 RAC3P60763 192 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 ID2Q02363 134 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 KIR2DS5Q14953 304 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 TBR1Q16650 682 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 ZNF585BQ52M93 769 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 MPV17L2Q567V2 206 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 MUC21Q5SSG8 566 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 OR1L8Q8NGR8 309 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 ZNF519Q8TB69 540 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 WBP2Q969T9 261 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 WBP1Q96G27 269 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 ZNF799Q96GE5 643 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 IL17FQ96PD4 163 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 RTN4RQ9BZR6 473 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 LINC00597Q9H2U6 94 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 RPP21Q9H633 154 aaKnown RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 SLC2A4RGQ9NR83 387 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 OTOFQ9HC10 1997 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 A0A0A6YYC8 382 aaPredicted RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 SHISA9B4DS77 424 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 SYS1-DBNDD2H3BUS1 97 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 I3L1I5 382 aaPredicted RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 RRHO14718 337 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 HBDP02042 147 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 HLA-DRB4P13762 266 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 UCP1P25874 307 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 PLNP26678 52 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 COL8A1P27658 744 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 CD52P31358 61 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 TIMP3P35625 211 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 ID4P47928 161 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 TM4SF4P48230 202 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 LGALS4P56470 323 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 WIPI1Q5MNZ9 446 aaPredicted RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 C10orf113Q5VZT2 155 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 MOGAT3Q86VF5 341 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 RPRMLQ8N4K4 120 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 TMEM171Q8WVE6 324 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 GNB4Q9HAV0 340 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 ANAPC10Q9UM13 185 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 HLA-DRB4X5D2U9 266 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 UBR3Q6ZT12 1888 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 DOCK5Q9H7D0 1870 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 TRBV7-9A0A0J9YWB2 115 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 A0A1W2PPC4 97 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 A0A1W2PPI3 338 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 FAM157AC9JC47 383 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 CITO14578 2027 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 PIN1P1O15428 100 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 IGHG4P01861 327 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 IGLC1P0CG04 106 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 LGALS3P17931 250 aaKnown RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 FCGR2BP31994 310 aaPredicted RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 EMDP50402 254 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 GAS1P54826 345 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 NOGQ13253 232 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 KLF5Q13887 457 aaPredicted RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 SP6Q3SY56 376 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 CENPWQ5EE01 88 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 TSPO2Q5TGU0 170 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 FAM90A2PQ658T7 463 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 BHLHA9Q7RTU4 235 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 ZNF525Q8N782 197 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 OR14C36Q8NHC7 312 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 WIPF2Q8TF74 440 aaPredicted RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 ADOQ96SZ5 270 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 RBM24Q9BX46 236 aaKnown RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 NPFFR1Q9GZQ6 430 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 ONECUT1Q9UBC0 465 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 TBC1D29Q9UFV1 150 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 MRPS18BQ9Y676 258 aaKnown RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 CLDN14O95500 239 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 B3GALT4O96024 378 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 GHRHP01286 108 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 IGKCP01834 107 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 ARL14EPLP0DKL9 152 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 PAX1P15863 534 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 CCL23P55773 120 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 DLX6P56179 175 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 TMEM258P61165 79 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 CX3CL1P78423 397 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 B4GALNT1Q00973 533 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 ZIC1Q15915 447 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 ZXDCQ2QGD7 858 aaPredicted RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 Q6ZS92 163 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 UBALD2Q8IYN6 164 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 GAPTQ8N292 157 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 SPEM1Q8N4L4 309 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 METTL27Q8N6F8 245 aaPredicted RBP1.89□□□□□ -2.11
USP53-202ENST00000450251 ST6GALNAC3Q8NDV1 305 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 OR11H6Q8NGC7 330 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 TIMD4Q96H15 378 aa1.89□□□□□ -2.11
USP53-202ENST00000450251 SPATA25Q9BR10 227 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms