RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 NCOR2Q9Y618 2525 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 SVILO95425 2214 aa2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 DICER1Q9UPY3 1922 aaKnown RBP2.76□□□□□ -1.97
HMGB1P48-201ENST00000446155 FER1L6Q2WGJ9 1857 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 CCDC88AQ3V6T2 1871 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 CDH23Q9H251 3354 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 ACACBO00763 2458 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 MRASO14807 208 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 CNIH1O95406 144 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 NRASP01111 189 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 HRASP01112 189 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 KRASP01116 189 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 G0S2P27469 103 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 MAGEA12P43365 314 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 MARCKSL1P49006 195 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 CTBP2P56545 445 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 HERVK_113P63121 156 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 IFITM2Q01629 132 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 EDDM3AQ14507 147 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 TAF1AQ15573 450 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 KRTAP13-3Q3SY46 172 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 HACD4Q5VWC8 232 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 TIFABQ6ZNK6 161 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 HIST2H3AQ71DI3 136 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZNF550Q7Z398 422 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR6V1Q8N148 313 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZFP62Q8NB50 900 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR1L8Q8NGR8 309 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 KCTD4Q8WVF5 259 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 FRZBQ92765 325 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 ANKRD36BP1Q96IX9 119 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 CEP19Q96LK0 163 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 SHANK2-AS3Q9BTD1 123 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 ALX4Q9H161 411 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 MED28Q9H204 178 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 C11orf49Q9H6J7 331 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 LINC00574Q9H8X3 128 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 RFNGQ9Y644 331 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 ARL5AQ9Y689 179 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 CHD9Q3L8U1 2897 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 GPR179Q6PRD1 2367 aa2.75□□□□□ -1.97
HMGB1P48-201ENST00000446155 PAPPA2Q9BXP8 1791 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 YLPM1P49750 1951 aaKnown RBP2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 PLXNB3Q9ULL4 1909 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 DNAH12Q6ZR08 3092 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 TRPM7Q96QT4 1865 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 A0A087WUJ7 227 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 IGHV3-21A0A0B4J1V1 117 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR5H14A6NHG9 310 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 C4orf51C9J302 202 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 TMEM238C9JI98 176 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 K7ERS5 55 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 DEDDO75618 318 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 STK16O75716 305 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 HAND1O96004 215 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 LHBP01229 141 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR5G3P0C626 314 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 CTLA4P16410 223 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR1E2P47887 323 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 PRDX4Q13162 271 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 TMEM97Q5BJF2 176 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 ACSBG2Q5FVE4 666 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 TMEM144Q7Z5S9 345 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 CALHM3Q86XJ0 350 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 AMN1Q8IY45 258 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 SAXO1Q8IYX7 474 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 C1orf158Q8N1D5 194 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 KRTCAP2Q8N6L1 136 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 UBL4BQ8N7F7 174 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 OR4A5Q8NH83 315 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 CMBLQ96DG6 245 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 ABHD14BQ96IU4 210 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 FOPNLQ96NB1 174 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 IP6K3Q96PC2 410 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 TRIB3Q96RU7 358 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 MED18Q9BUE0 208 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 TMEM109Q9BVC6 243 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 TSSK6Q9BXA6 273 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 PLA2G12AQ9BZM1 189 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 FKBP14Q9NWM8 211 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 RAB26Q9ULW5 256 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 PCYT1BQ9Y5K3 369 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 REV3LO60673 3130 aa2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 RIF1Q5UIP0 2472 aaKnown RBP2.74□□□□□ -1.97
HMGB1P48-201ENST00000446155 DOCK9Q9BZ29 2069 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 ASH1LQ9NR48 2969 aaKnown RBP2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 KMT2EQ8IZD2 1858 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 DCHS1Q96JQ0 3298 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 COL4A5P29400 1685 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 TRIOO75962 3097 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 SLX4Q8IY92 1834 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 KIAA1671Q9BY89 1806 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 DENRO43583 198 aaKnown RBP2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 PRB2P02812 416 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 CD79AP11912 226 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 PTHLHP12272 177 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 MAP2K4P45985 399 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 LINC00313P59037 77 aa2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 ZNF816Q0VGE8 651 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P48-201ENST00000446155 PMAIP1Q13794 54 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms