RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 LGALS4P56470 323 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 FXYD3Q14802 87 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 ASPHD1Q5U4P2 390 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 MIC13Q5XKP0 118 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 OR10D3Q8NH80 312 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 SF3B5Q9BWJ5 86 aaKnown RBP11.68□□□□□ -0.54
VPS52-212ENST00000445902 TNRC6AQ8NDV7 1962 aaKnown RBP11.68□□□□□ -0.54
VPS52-212ENST00000445902 TNRC6BQ9UPQ9 1833 aaKnown RBP11.68□□□□□ -0.54
VPS52-212ENST00000445902 LOC105371242A0A075B767 164 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 M0QZ24 198 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 CEBPDP49716 269 aaPredicted RBP11.68□□□□□ -0.54
VPS52-212ENST00000445902 ZNF83P51522 516 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 ARF1P84077 181 aaKnown RBP11.68□□□□□ -0.54
VPS52-212ENST00000445902 SPATA46Q5T0L3 261 aa11.68□□□□□ -0.54
VPS52-212ENST00000445902 C19orf25Q9UFG5 118 aaPredicted RBP11.68□□□□□ -0.54
VPS52-212ENST00000445902 A0A1W2PS18 150 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 ZNF253O75346 499 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 CD1BP29016 333 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 KLF3P57682 345 aaPredicted RBP11.67□□□□□ -0.54
VPS52-212ENST00000445902 NXPH1P58417 271 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 HOXA4Q00056 320 aaPredicted RBP11.67□□□□□ -0.54
VPS52-212ENST00000445902 RPEL1Q2QD12 228 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 WIPI1Q5MNZ9 446 aaPredicted RBP11.67□□□□□ -0.54
VPS52-212ENST00000445902 GGNQ86UU5 652 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 ORAOV1Q8WV07 137 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 SSMEM1Q8WWF3 244 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 RARRES3Q9UL19 164 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 TET2Q6N021 2002 aaPredicted RBP11.67□□□□□ -0.54
VPS52-212ENST00000445902 RFPL3SP0C7P2 107 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 GFRA1P56159 465 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 Q0VG73 95 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 UBE2V1Q13404 147 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 PCOLCEQ15113 449 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 COLCA1Q6ZS62 124 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 IFI44Q8TCB0 444 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 TRBV6-6A0A0A6YYG2 114 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 DPRXA6NFQ7 191 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 SRIP30626 198 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 S100A7P31151 101 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 H2BFWTQ7Z2G1 175 aa11.67□□□□□ -0.54
VPS52-212ENST00000445902 CEP192Q8TEP8 1941 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 OR2H2O95918 312 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 TRIP6Q15654 476 aaKnown RBP11.66□□□□□ -0.54
VPS52-212ENST00000445902 SPATA31B1PQ5VZV4 182 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 MRPL54Q6P161 138 aaKnown RBP11.66□□□□□ -0.54
VPS52-212ENST00000445902 DOLPP1Q86YN1 238 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 OR52L2PQ8NGH6 319 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 KCNS1Q96KK3 526 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 RNASE7Q9H1E1 156 aaKnown RBP11.66□□□□□ -0.54
VPS52-212ENST00000445902 COX11Q9Y6N1 276 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 C15orf62A8K5M9 175 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 TSPOP30536 169 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 SSR4P51571 173 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 BRWD1-AS2P59051 145 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 SRYQ05066 204 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 VASH2Q86V25 355 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 OR4C5Q8NGB2 326 aa11.66□□□□□ -0.54
VPS52-212ENST00000445902 CBY3A6NI87 242 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 GJE1A6NN92 205 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 FOXH1O75593 365 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 OTX2P32243 289 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 B3GALT5-AS1P59052 145 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 PDLIM3Q53GG5 364 aaPredicted RBP11.65□□□□□ -0.54
VPS52-212ENST00000445902 PRR31Q5SQ13 230 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 Q6P435 159 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 PI4KAP42356 2102 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 RNF212BA8MTL3 300 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 TFF1P04155 84 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 CDKN1BP46527 198 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 VWC2Q2TAL6 325 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 PLPPR2Q96GM1 343 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 WDR83OSQ9Y284 106 aa11.65□□□□□ -0.54
VPS52-212ENST00000445902 ANKRD30BLA7E2S9 258 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 A8MXE2 369 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 NPIPB11E5RHQ5 1161 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 ZNF497Q6ZNH5 498 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 NIT1Q86X76 327 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 GMPPAQ96IJ6 420 aaPredicted RBP11.64□□□□□ -0.55
VPS52-212ENST00000445902 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 ITGB1BP1O14713 200 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 ZNF324O75467 553 aaPredicted RBP11.64□□□□□ -0.55
VPS52-212ENST00000445902 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 RAC2P15153 192 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 FBLN7Q53RD9 439 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 ST6GALNAC6Q969X2 333 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 V9GYV3 84 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 KNTC1P50748 2209 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 PRRC2CQ9Y520 2896 aaKnown RBP11.64□□□□□ -0.55
VPS52-212ENST00000445902 DEFB108AA8MXU0 73 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 NEURL1O76050 574 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 P0C879 139 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 GUSBP11Q6P575 273 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 ZNF645Q8N7E2 425 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 EAF1Q96JC9 268 aaPredicted RBP11.64□□□□□ -0.55
VPS52-212ENST00000445902 MGST2Q99735 147 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 SFXN3Q9BWM7 321 aa11.64□□□□□ -0.55
VPS52-212ENST00000445902 FAM234AQ9H0X4 552 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms