RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 IGKV1-33P01594 117 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 FOXA3P55318 350 aaPredicted RBP6.75□□□□□ -1.33
RIF1-205ENST00000444746 LINC00596Q86U02 117 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 PITPNC1Q9UKF7 332 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 FOXI3A8MTJ6 420 aaPredicted RBP6.75□□□□□ -1.33
RIF1-205ENST00000444746 CLDN18P56856 261 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 GNG5P63218 68 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 GCSAMLQ5JQS6 135 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 C10orf128Q5T292 105 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 LAMTOR1Q6IAA8 161 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 GCSAMQ8N6F7 178 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 ST6GALNAC6Q969X2 333 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 GSX1Q9H4S2 264 aaPredicted RBP6.75□□□□□ -1.33
RIF1-205ENST00000444746 VSIRQ9H7M9 311 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 ZNF735P0CB33 412 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 DHRS11Q6UWP2 260 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 GOLT1AQ6ZVE7 132 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 ZNF502Q8TBZ5 544 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 TMEM106BQ9NUM4 274 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 FOXA2Q9Y261 457 aaPredicted RBP6.75□□□□□ -1.33
RIF1-205ENST00000444746 CD74P04233 296 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 IL6RP08887 468 aaPredicted RBP6.75□□□□□ -1.33
RIF1-205ENST00000444746 PSMB2P49721 201 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 PCSK4Q6UW60 755 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 OR4A5Q8NH83 315 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 ANAPC16Q96DE5 110 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 GPR61Q9BZJ8 451 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 PGPEP1LA6NFU8 196 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 F8VVB4 439 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 F8VWA3 439 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 CSRP2Q16527 193 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 SCGB1D4Q6XE38 83 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 RAB37Q96AX2 223 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 METRNQ9UJH8 293 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 YTHDF2Q9Y5A9 579 aaKnown RBP6.75□□□□□ -1.33
RIF1-205ENST00000444746 TRIP12Q14669 1992 aaPredicted RBP6.75□□□□□ -1.33
RIF1-205ENST00000444746 RAMP3O60896 148 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 CD59P13987 128 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 KLHDC1Q8N7A1 406 aa6.75□□□□□ -1.33
RIF1-205ENST00000444746 POLR2AP24928 1970 aaKnown RBP6.75□□□□□ -1.33
RIF1-205ENST00000444746 PDE6DO43924 150 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 Q6ZT83 130 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 MIR17HGQ75NE6 70 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 NABP2Q9BQ15 211 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 C1RLQ9NZP8 487 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 TUBD1Q9UJT1 453 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 SCO2A0A1W2PP80 73 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 RBFOX2O43251 390 aaKnown RBP eCLIP6.74□□□□□ -1.338e-7■■□□□ 13.4
RIF1-205ENST00000444746 CLPSP04118 112 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 TMEM183BQ1AE95 376 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 CYB5R2Q6BCY4 276 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 ALX4Q9H161 411 aaPredicted RBP6.74□□□□□ -1.33
RIF1-205ENST00000444746 HSPB7Q9UBY9 170 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 C9JCJ5 164 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 DIRC3C9JPN6 131 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 PDLIM4P50479 330 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 TM4SF20Q53R12 229 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 STPG3Q8N7X2 389 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 OR51G1Q8NGK1 321 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 NEUROG1Q92886 237 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 LOXL4Q96JB6 756 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 METTL26Q96S19 204 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 ZMAT5Q9UDW3 170 aaKnown RBP6.74□□□□□ -1.33
RIF1-205ENST00000444746 XIRP1Q702N8 1843 aaKnown RBP6.74□□□□□ -1.33
RIF1-205ENST00000444746 IL4P05112 153 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 CCKARP32238 428 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 TNFSF10P50591 281 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 HSPE1P61604 102 aaKnown RBP6.74□□□□□ -1.33
RIF1-205ENST00000444746 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
RIF1-205ENST00000444746 ZNF345Q14585 488 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 CLPPQ16740 277 aaPredicted RBP6.74□□□□□ -1.33
RIF1-205ENST00000444746 LINC00305Q7Z4B0 112 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 PKIBQ9C010 78 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
RIF1-205ENST00000444746 OR2T8A6NH00 312 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 KLF7O75840 302 aaPredicted RBP6.74□□□□□ -1.33
RIF1-205ENST00000444746 FAM106CPP0CH98 169 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 KLRD1Q13241 179 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 RIGQ13278 110 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 TMEM177Q53S58 311 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 ZBTB34Q8NCN2 500 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 IGKV1-12A0A0C4DH73 117 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 IGKV1D-12P01611 117 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 NAT1P18440 290 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 LRRC75BQ2VPJ9 315 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 ZNF385CQ66K41 422 aaPredicted RBP6.74□□□□□ -1.33
RIF1-205ENST00000444746 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 IL19Q9UHD0 177 aa6.74□□□□□ -1.33
RIF1-205ENST00000444746 C5orf52A6NGY3 159 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 IFITM10A6NMD0 228 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 KBTBD11O94819 623 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 DLX1P56177 255 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 TCF23Q7RTU1 214 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 TCTEX1D1Q8N7M0 179 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 OR51M1Q9H341 326 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 ZNF430Q9H8G1 570 aaPredicted RBP6.73□□□□□ -1.33
RIF1-205ENST00000444746 ZNF107Q9UII5 783 aaPredicted RBP6.73□□□□□ -1.33
RIF1-205ENST00000444746 KNL1Q8NG31 2342 aa6.73□□□□□ -1.33
RIF1-205ENST00000444746 HOXD4P09016 255 aaPredicted RBP6.73□□□□□ -1.33
RIF1-205ENST00000444746 CLEC19AQ6UXS0 136 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms