RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PPBPP02775 128 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 LCATP04180 440 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 CECR9P0C854 216 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 NTF4P34130 210 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 RPL29P47914 159 aaKnown RBP5.35□□□□□ -1.55
HDAC6-210ENST00000441703 RAB7AP51149 207 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 ELLP55199 621 aaPredicted RBP5.35□□□□□ -1.55
HDAC6-210ENST00000441703 PAFAH1B2P68402 229 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 EWSR1Q01844 656 aaKnown RBP eCLIP5.35□□□□□ -1.55
HDAC6-210ENST00000441703 RPL18Q07020 188 aaKnown RBP5.35□□□□□ -1.55
HDAC6-210ENST00000441703 GNMTQ14749 295 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 NRN1LQ496H8 165 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 OXLD1Q5BKU9 147 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 PLAC9Q5JTB6 97 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 ACTL10Q5JWF8 245 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 ZNF66Q6ZN08 573 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 TEX43Q6ZNM6 134 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 SSX7Q7RTT5 188 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 LGI3Q8N145 548 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 ZNF524Q96C55 264 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 ANAPC16Q96DE5 110 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 FAAP24Q9BTP7 215 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 RBKSQ9H477 322 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 NAA60Q9H7X0 242 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 DNAJC4Q9NNZ3 241 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 SLC7A10Q9NS82 523 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 LYRM2Q9NU23 88 aaPredicted RBP5.35□□□□□ -1.55
HDAC6-210ENST00000441703 MRPL22Q9NWU5 206 aaKnown RBP5.35□□□□□ -1.55
HDAC6-210ENST00000441703 EHFQ9NZC4 300 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 NAT8Q9UHE5 227 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 AK3Q9UIJ7 227 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 LRP12Q9Y561 859 aa5.35□□□□□ -1.55
HDAC6-210ENST00000441703 C20orf202A1L168 122 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 MAP1LC3B2A6NCE7 125 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 FOXI3A8MTJ6 420 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-210ENST00000441703 SERPINE3A8MV23 424 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 H3BSH0 61 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 SOCS1O15524 211 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 YPEL1O60688 119 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 FOXH1O75593 365 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 NXPH2O95156 264 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 CDS2O95674 445 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 TOMM40O96008 361 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 BGLAPP02818 100 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 PI3P19957 117 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 UCP1P25874 307 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 SNU13P55769 128 aaKnown RBP5.34□□□□□ -1.55
HDAC6-210ENST00000441703 UCP3P55916 312 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 TAS2R30P59541 319 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 RPL27P61353 136 aaKnown RBP5.34□□□□□ -1.55
HDAC6-210ENST00000441703 VAMP2P63027 116 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 RELBQ01201 579 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 BAXQ07812 192 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 ARFRP1Q13795 201 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 TSPO2Q5TGU0 170 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 GLIPR1L1Q6UWM5 242 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 LIAT1Q6ZQX7 453 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 SMIM15Q7Z3B0 74 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 ABHD12BQ7Z5M8 362 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-210ENST00000441703 C11orf42Q8N5U0 333 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 OR2C3Q8N628 320 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 C10orf53Q8N6V4 93 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 FAM169BQ8N8A8 192 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 CPEB3Q8NE35 698 aaKnown RBP5.34□□□□□ -1.55
HDAC6-210ENST00000441703 OR51G1Q8NGK1 321 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 OR4D5Q8NGN0 318 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 LINC01006Q8NI28 216 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 ZNF519Q8TB69 540 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 ST8SIA1Q92185 356 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 TMEM45BQ96B21 275 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 MOB3AQ96BX8 217 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 TIMD4Q96H15 378 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 YPEL2Q96QA6 119 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 OR5B12Q96R08 314 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 ABHD14AQ9BUJ0 271 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 MAP1LC3BQ9GZQ8 125 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 SERINC1Q9NRX5 453 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 OR6C3Q9NZP0 311 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 RNF150Q9ULK6 438 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 FUT9Q9Y231 359 aa5.34□□□□□ -1.55
HDAC6-210ENST00000441703 RCL1Q9Y2P8 373 aaKnown RBP5.34□□□□□ -1.55
HDAC6-210ENST00000441703 MRPS28Q9Y2Q9 187 aaKnown RBP5.34□□□□□ -1.55
HDAC6-210ENST00000441703 DYNC2H1Q8NCM8 4307 aaKnown RBP5.33□□□□□ -1.56
HDAC6-210ENST00000441703 IGHV3OR16-10A0A075B7F0 116 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 MDFIC2A0A1B0GVS7 189 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 ZNF705FA8MVS1 300 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-210ENST00000441703 SRRM5B3KS81 715 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 HSBP1L1C9JCN9 74 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 AHSA1O95433 338 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 DIRAS3O95661 229 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 SCGB1D2O95969 90 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 MT-ATP6P00846 226 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 HRASP01112 189 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 IFNA1P01562 189 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 IGKV3-15P01624 115 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 HLA-DQA2P01906 255 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 DBHP09172 617 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 H2BFMP0C1H6 154 aa5.33□□□□□ -1.56
HDAC6-210ENST00000441703 ZNF705DP0CH99 300 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-210ENST00000441703 ZNF705BP0CI00 300 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms