RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 RTBDNQ9BSG5 229 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 C5orf66Q9H5L9 145 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 NUDT15Q9NV35 164 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 RDH8Q9NYR8 311 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 TAS2R3Q9NYW6 316 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 IDI2-AS1Q9NZ38 188 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 KCNIP1Q9NZI2 227 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 OR6C3Q9NZP0 311 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 FAM30AQ9NZY2 134 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ZNRD1Q9P1U0 126 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 CLN8Q9UBY8 286 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 SLC23A1Q9UHI7 598 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 SCP2D1Q9UJQ7 156 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 MGAT4AQ9UM21 535 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 TMA7Q9Y2S6 64 aaKnown RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 UBE2J1Q9Y385 318 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 NUBP2Q9Y5Y2 271 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 IGHV2-70DA0A0C4DH43 119 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 A0A1W2PPE3 182 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 YPEL1O60688 119 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 PROP1O75360 226 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 IGHV4-59P01825 116 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 CTSDP07339 412 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-206ENST00000441089 CTXN2P0C2S0 81 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF728P0DKX0 622 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 IGHV1-8P0DP01 117 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 PGAM2P15259 253 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 GNRHRP30968 328 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 CEACAM6P40199 344 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 IER3P46695 156 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 UCP3P55916 312 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 DHODHQ02127 395 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 EIF4EBP1Q13541 118 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-206ENST00000441089 TATDN3Q17R31 274 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 CT45A1Q5HYN5 189 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 HEPN1Q6WQI6 88 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF818PQ6ZRF7 136 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 TMEM17Q86X19 198 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 ODF3L1Q8IXM7 274 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF565Q8N9K5 539 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 OR52B4Q8NGK2 314 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 OR6F1Q8NGZ6 308 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 OR10J5Q8NHC4 309 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 CT45A3Q8NHU0 189 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 TOMM40LQ969M1 308 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF714Q96N38 554 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 RCHY1Q96PM5 261 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 YPEL2Q96QA6 119 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 SLC25A21Q9BQT8 299 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-206ENST00000441089 AGMATQ9BSE5 352 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 SLC5A7Q9GZV3 580 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 IFI27L2Q9H2X8 130 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 OR2S2Q9NQN1 319 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 CCL28Q9NRJ3 127 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 COPZ2Q9P299 210 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 JPT1Q9UK76 154 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 OR2W1Q9Y3N9 320 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 ALG5Q9Y673 324 aa3.8□□□□□ -1.8
PTPN4-206ENST00000441089 PLECQ15149 4684 aaKnown RBP3.8□□□□□ -1.8
PTPN4-206ENST00000441089 ALMS1Q8TCU4 4167 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
PTPN4-206ENST00000441089 A0A087X0M5 115 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 A0A1B0GX30 115 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 C7orf66A4D0T2 115 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 HSD17B6O14756 317 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 SPINT2O43291 252 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 HSPA12AO43301 675 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 PEX14O75381 377 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 RLN1P04808 185 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 IL5P05113 134 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 LIPFP07098 398 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 ELANEP08246 267 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 OR8U9P0C7N5 309 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 MMP9P14780 707 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 ZBTB25P24278 435 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 NFYBP25208 207 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 CD34P28906 385 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 GNG10P50151 68 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 LUMP51884 338 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-206ENST00000441089 LINC00205P59089 165 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-206ENST00000441089 UBE2MP61081 183 aaKnown RBP3.79□□□□□ -1.8
PTPN4-206ENST00000441089 RAP2BP61225 183 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 HERV-K104P61576 105 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 ARF6P62330 175 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 SUPT4H1P63272 117 aaKnown RBP3.79□□□□□ -1.8
PTPN4-206ENST00000441089 FOXI1Q12951 378 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 KLRD1Q13241 179 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 PPP1R1AQ13522 171 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 SURF2Q15527 256 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-206ENST00000441089 PHLDA2Q53GA4 152 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 TCTEX1D4Q5JR98 221 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 TOR2AQ5JU69 321 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 LY6G6FQ5SQ64 297 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 LDLRAD2Q5SZI1 272 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 METTL11BQ5VVY1 283 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 GLDNQ6ZMI3 551 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-206ENST00000441089 TMED4Q7Z7H5 227 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 SLC25A42Q86VD7 318 aa3.79□□□□□ -1.8
PTPN4-206ENST00000441089 CADM3Q8N126 398 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms