RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 AQP4P55087 323 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 AP3S2P59780 193 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 CXCR4P61073 352 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC35B1P78383 322 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 APOFQ13790 326 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 KIR2DS1Q14954 304 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 GABRA6Q16445 453 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 NDUFAF6Q330K2 333 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 RFX4Q33E94 735 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZBED5Q49AG3 693 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 LIN52Q52LA3 116 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ATP6AP1LQ52LC2 224 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ACTBL2Q562R1 376 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 COA6Q5JTJ3 125 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 PAGE3Q5JUK9 113 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 AVPI1Q5T686 147 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 LPCAT4Q643R3 524 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 GLYATQ6IB77 296 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 NOXRED1Q6NXP6 359 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 AGTRAPQ6RW13 159 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 DRAM2Q6UX65 266 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 WDR82Q6UXN9 313 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 IZUMO2Q6UXV1 221 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 Q6ZN92 141 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 MBOAT1Q6ZNC8 495 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF621Q6ZSS3 439 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 RFLNAQ6ZTI6 216 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 PAGE2Q7Z2X7 111 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 LYG2Q86SG7 212 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 MRPL52Q86TS9 123 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 THOC6Q86W42 341 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF547Q8IVP9 402 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC30A8Q8IWU4 369 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 MSRB3Q8IXL7 192 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZCCHC24Q8N2G6 241 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 PNKDQ8N490 385 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 LFNGQ8NES3 379 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR5L1Q8NGL2 311 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR9I1Q8NGQ6 314 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR51A7Q8NH64 312 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR5AK3PQ8NH89 298 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 PIFOQ8TCI5 191 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 CANT1Q8WVQ1 401 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ACOT11Q8WXI4 607 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 BAALCQ8WXS3 180 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 TFGQ92734 400 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 RAD51AP1Q96B01 352 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 DCUN1D1Q96GG9 259 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 PYURFQ96I23 114 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 TEX37Q96LM6 180 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 RNF145Q96MT1 663 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 OXGR1Q96P68 337 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR4K3Q96R72 315 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR8B4Q96RC9 309 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 TIMM29Q9BSF4 260 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMEM70Q9BUB7 260 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF426Q9BUY5 554 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 EFCAB11Q9BUY7 163 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMED9Q9BVK6 235 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 RIOK2Q9BVS4 552 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 UGT2B28Q9BY64 529 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 DPY30Q9C005 99 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR11A1Q9GZK7 315 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 TOLLIPQ9H0E2 274 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 C20orf85Q9H1P6 137 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 DUSP21Q9H596 190 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 TMEM38AQ9H6F2 299 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 ARMC7Q9H6L4 198 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 RPF2Q9H7B2 306 aaKnown RBP1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 SIAEQ9HAT2 523 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 PLEKHA1Q9HB21 404 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 MCUBQ9NWR8 336 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 BABAM2Q9NXR7 383 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 SLC25A37Q9NYZ2 338 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 KCNIP1Q9NZI2 227 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 VPS29Q9UBQ0 182 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 CYB5R1Q9UHQ9 305 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 RNF11Q9Y3C5 154 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 TIMM22Q9Y584 194 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 HSPE1-MOB4S4R3N1 261 aa1.35□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A0B4J2A0 478 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A0B4J2E0 115 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A1B0GX12 115 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ANKRD20A5PA0PJZ0 165 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ARRDC5A6NEK1 342 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 K7EMT4 169 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 M0QXV9 152 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 CXCR6O00574 342 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 KMOO15229 486 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 SGCEO43556 437 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 MPDU1O75352 247 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 GCM2O75603 506 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 TRAPPC6AO75865 159 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 KRT75O95678 551 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 OXSR1O95747 527 aaPredicted RBP1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 PDYNP01213 254 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 GCGP01275 180 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 ORM1P02763 201 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 GUSBP08236 651 aa1.34□□□□□ -2.19
HMGB1P18-201ENST00000438801 C8orf88P0DMB2 117 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms