RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 MORN2Q502X0 79 aa9.8□□□□□ -0.84
CD44-209ENST00000433892 SPRNQ5BIV9 151 aa9.8□□□□□ -0.84
CD44-209ENST00000433892 ZNRF1Q8ND25 227 aa9.8□□□□□ -0.84
CD44-209ENST00000433892 Q8TCH9 128 aa9.8□□□□□ -0.84
CD44-209ENST00000433892 NEIL1Q96FI4 390 aaPredicted RBP9.8□□□□□ -0.84
CD44-209ENST00000433892 OR5B12Q96R08 314 aa9.8□□□□□ -0.84
CD44-209ENST00000433892 ZNF71Q9NQZ8 489 aaPredicted RBP9.8□□□□□ -0.84
CD44-209ENST00000433892 CNOT1A5YKK6 2376 aaKnown RBP9.79□□□□□ -0.84
CD44-209ENST00000433892 HCFC1P51610 2035 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 TRAV17A0A0B4J275 112 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 GYPAP02724 150 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 UBE2G2P60604 165 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 TRAT1Q6PIZ9 186 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 OR4A16Q8NH70 328 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 STARD4Q96DR4 205 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 PFDN5Q99471 154 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 PYGO2Q9BRQ0 406 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 PCGF1Q9BSM1 259 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 TUBG2Q9NRH3 451 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 DKK4Q9UBT3 224 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 PITPNC1Q9UKF7 332 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 WDR83OSQ9Y284 106 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 TRAV3A0A0B4J244 114 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 A0A1W2PPQ1 181 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 SRRM5B3KS81 715 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 PPP5D1E7EU14 171 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 RRHO14718 337 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 HPRT1P00492 218 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 UTF1Q5T230 341 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 BHLHA15Q7RTS1 189 aaPredicted RBP9.79□□□□□ -0.84
CD44-209ENST00000433892 LEAP2Q969E1 77 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 PACRGQ96M98 296 aaPredicted RBP9.79□□□□□ -0.84
CD44-209ENST00000433892 HIST1H2BLQ99880 126 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 PATZ1Q9HBE1 687 aaKnown RBP9.79□□□□□ -0.84
CD44-209ENST00000433892 HEYLQ9NQ87 328 aaPredicted RBP9.79□□□□□ -0.84
CD44-209ENST00000433892 AURKAIP1Q9NWT8 199 aaPredicted RBP9.79□□□□□ -0.84
CD44-209ENST00000433892 PROCRQ9UNN8 238 aa9.79□□□□□ -0.84
CD44-209ENST00000433892 ICE1Q9Y2F5 2266 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 ZNF83P51522 516 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 PAX5Q02548 391 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 CST9LP1Q5W188 147 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 IGFL2Q6UWQ7 119 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 FAM90A1Q86YD7 464 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 LURAP1LQ8IV03 231 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 GCSAMQ8N6F7 178 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 MEGF10Q96KG7 1140 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 PRDM13Q9H4Q3 707 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 JPT1Q9UK76 154 aa9.78□□□□□ -0.84
CD44-209ENST00000433892 SPAARA0A1B0GVQ0 90 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 A0A1B0GWJ7 208 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 ZNF729A6NN14 1252 aaPredicted RBP9.77□□□□□ -0.84
CD44-209ENST00000433892 MGST3O14880 152 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 HRASP01112 189 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 CGAP01215 116 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 HIST1H1BP16401 226 aaKnown RBP9.77□□□□□ -0.84
CD44-209ENST00000433892 ATP5G3P48201 142 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 LOXL3P58215 753 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 SPCS3P61009 180 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 MOGAT3Q86VF5 341 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 ABHD12Q8N2K0 398 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 SDSLQ96GA7 329 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 OR2V2Q96R30 315 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 DIRC2Q96SL1 478 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 SLC25A15Q9Y619 301 aa9.77□□□□□ -0.84
CD44-209ENST00000433892 MAP1BP46821 2468 aaKnown RBP9.77□□□□□ -0.84
CD44-209ENST00000433892 A0A1W2PPV4 95 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 SLC31A2O15432 143 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 GALR2O43603 387 aaPredicted RBP9.77□□□□□ -0.85
CD44-209ENST00000433892 YPEL1O60688 119 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 CD82P27701 267 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 CHRNA7P36544 502 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 ERVK-16P61578 105 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 MZT1Q08AG7 82 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 GAMTQ14353 236 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 AARDQ4LEZ3 155 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 VHLLQ6RSH7 139 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 TREML4Q6UXN2 200 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 C1orf229Q6ZS94 237 aaPredicted RBP9.77□□□□□ -0.85
CD44-209ENST00000433892 DEFB124Q8NES8 71 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 YPEL2Q96QA6 119 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 S1PR3Q99500 378 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 DERL1Q9BUN8 251 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 IFI27L2Q9H2X8 130 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 GFOD1Q9NXC2 390 aa9.77□□□□□ -0.85
CD44-209ENST00000433892 ZMAT5Q9UDW3 170 aaKnown RBP9.77□□□□□ -0.85
CD44-209ENST00000433892 NDUFB4O95168 129 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 SELLP14151 372 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 VDAC2P45880 294 aaPredicted RBP9.76□□□□□ -0.85
CD44-209ENST00000433892 GNB1P62873 340 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 RELBQ01201 579 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 P2RY6Q15077 328 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 DEFB109BQ30KR1 87 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 FAM201AQ5SY85 155 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 SEM1Q6ZVN7 128 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 TGIF2LYQ8IUE0 185 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 TMEM183AQ8IXX5 376 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 ANAPC16Q96DE5 110 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 ASCL3Q9NQ33 180 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 TMEM140Q9NV12 185 aa9.76□□□□□ -0.85
CD44-209ENST00000433892 KALRNO60229 2985 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms