RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MAP2K4P45985 399 aa11.31□□□□□ -0.6
MSH5-208ENST00000429846 RHOGP84095 191 aa11.31□□□□□ -0.6
MSH5-208ENST00000429846 EXOSC2Q13868 293 aaKnown RBP11.31□□□□□ -0.6
MSH5-208ENST00000429846 SLC25A42Q86VD7 318 aa11.31□□□□□ -0.6
MSH5-208ENST00000429846 MMD2Q8IY49 270 aa11.31□□□□□ -0.6
MSH5-208ENST00000429846 ZNF645Q8N7E2 425 aa11.31□□□□□ -0.6
MSH5-208ENST00000429846 NRG4Q8WWG1 115 aa11.31□□□□□ -0.6
MSH5-208ENST00000429846 AKIP1Q9NQ31 210 aa11.31□□□□□ -0.6
MSH5-208ENST00000429846 ADAM30Q9UKF2 790 aa11.31□□□□□ -0.6
MSH5-208ENST00000429846 MRPS7Q9Y2R9 242 aaKnown RBP11.31□□□□□ -0.6
MSH5-208ENST00000429846 PRELID3BQ9Y3B1 194 aa11.31□□□□□ -0.6
MSH5-208ENST00000429846 DYNC2H1Q8NCM8 4307 aaKnown RBP11.31□□□□□ -0.6
MSH5-208ENST00000429846 CSMD3Q7Z407 3707 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 TRDV1A0A1B0GX56 115 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 BMPR1BO00238 502 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 RBMXL2O75526 392 aaKnown RBP11.3□□□□□ -0.6
MSH5-208ENST00000429846 CTXN2P0C2S0 81 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 HSPA13P48723 471 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 MECP2P51608 486 aaKnown RBP11.3□□□□□ -0.6
MSH5-208ENST00000429846 ATP5G2Q06055 141 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 KCTD9Q7L273 389 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 TTC9CQ8N5M4 171 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 NECAP1Q8NC96 275 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 VSTM2AQ8TAG5 236 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 KCTD12Q96CX2 325 aaKnown RBP11.3□□□□□ -0.6
MSH5-208ENST00000429846 VCX3BQ9H321 246 aa11.3□□□□□ -0.6
MSH5-208ENST00000429846 ZNF430Q9H8G1 570 aaPredicted RBP11.3□□□□□ -0.6
MSH5-208ENST00000429846 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.29□□□□□ -0.6
MSH5-208ENST00000429846 ZNF45Q02386 682 aa11.29□□□□□ -0.6
MSH5-208ENST00000429846 DCUN1D5Q9BTE7 237 aa11.29□□□□□ -0.6
MSH5-208ENST00000429846 ATG5Q9H1Y0 275 aa11.29□□□□□ -0.6
MSH5-208ENST00000429846 DCSTAMPQ9H295 470 aa11.29□□□□□ -0.6
MSH5-208ENST00000429846 SLC2A8Q9NY64 477 aa11.29□□□□□ -0.6
MSH5-208ENST00000429846 ZNF257Q9Y2Q1 563 aa11.29□□□□□ -0.6
MSH5-208ENST00000429846 OR2W1Q9Y3N9 320 aa11.29□□□□□ -0.6
MSH5-208ENST00000429846 CEPT1Q9Y6K0 416 aa11.29□□□□□ -0.6
MSH5-208ENST00000429846 IGKV1D-8A0A087WSZ0 117 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 IZUMO1RA6ND01 250 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 FCGR3BO75015 233 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 SCGNO76038 276 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 TPPPO94811 219 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 HLA-DQB1P01920 261 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 CD81P60033 236 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 C15orf32Q32M92 178 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 HACD4Q5VWC8 232 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 OR4S2Q8NH73 311 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 IL17DQ8TAD2 202 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 DYNLRB2Q8TF09 96 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 HSD17B10Q99714 261 aaKnown RBP11.28□□□□□ -0.6
MSH5-208ENST00000429846 RBMX2Q9Y388 322 aaKnown RBP11.28□□□□□ -0.6
MSH5-208ENST00000429846 LYSTQ99698 3801 aa11.28□□□□□ -0.6
MSH5-208ENST00000429846 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
MSH5-208ENST00000429846 LGALS9O00182 355 aa11.27□□□□□ -0.61
MSH5-208ENST00000429846 PRH1P02810 166 aa11.27□□□□□ -0.61
MSH5-208ENST00000429846 CD300EQ496F6 205 aaPredicted RBP11.27□□□□□ -0.61
MSH5-208ENST00000429846 CDNFQ49AH0 187 aa11.27□□□□□ -0.61
MSH5-208ENST00000429846 LINC00322Q6ZN03 302 aaPredicted RBP11.27□□□□□ -0.61
MSH5-208ENST00000429846 NEURL2Q9BR09 285 aa11.27□□□□□ -0.61
MSH5-208ENST00000429846 OR51E2Q9H255 320 aa11.27□□□□□ -0.61
MSH5-208ENST00000429846 PLEKHA3Q9HB20 300 aa11.27□□□□□ -0.61
MSH5-208ENST00000429846 TECRQ9NZ01 308 aaKnown RBP11.27□□□□□ -0.61
MSH5-208ENST00000429846 STARD9Q9P2P6 4700 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 NPIPB5A8MRT5 1133 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 GGCTO75223 188 aaKnown RBP11.26□□□□□ -0.61
MSH5-208ENST00000429846 KBTBD11O94819 623 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 NFYAP23511 347 aaPredicted RBP11.26□□□□□ -0.61
MSH5-208ENST00000429846 MAS1LP35410 378 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 C10orf55Q5SWW7 151 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 C22orf42Q6IC83 251 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 CNIH2Q6PI25 160 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 NR2C2APQ86WQ0 139 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 OR2A7Q96R45 310 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 ST6GALNAC5Q9BVH7 336 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 HIPK2Q9H2X6 1198 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 ZC4H2Q9NQZ6 224 aa11.26□□□□□ -0.61
MSH5-208ENST00000429846 GAR1Q9NY12 217 aaKnown RBP11.26□□□□□ -0.61
MSH5-208ENST00000429846 ELF5Q9UKW6 265 aaPredicted RBP11.26□□□□□ -0.61
MSH5-208ENST00000429846 DPPA5A6NC42 116 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 C2orf70A6NJV1 201 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 NOTOA8MTQ0 251 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 TEX22C9J3V5 150 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 MRPS14O60783 128 aaKnown RBP11.25□□□□□ -0.61
MSH5-208ENST00000429846 OR2J3O76001 311 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 DHFRP00374 187 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 IGLV2-14P01704 120 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 FGF9P31371 208 aaPredicted RBP11.25□□□□□ -0.61
MSH5-208ENST00000429846 KIR2DS2P43631 304 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 RPL27AP46776 148 aaKnown RBP11.25□□□□□ -0.61
MSH5-208ENST00000429846 GABARAPL2P60520 117 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 DEFB114Q30KQ6 69 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 OR2B11Q5JQS5 317 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 IZUMO2Q6UXV1 221 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 ADAMTSL5Q6ZMM2 481 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 PUSL1Q8N0Z8 303 aaKnown RBP11.25□□□□□ -0.61
MSH5-208ENST00000429846 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 TCTEX1D2Q8WW35 142 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 CNBD2Q96M20 576 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 SLC2A9Q9NRM0 540 aa11.25□□□□□ -0.61
MSH5-208ENST00000429846 TMEM235A6NFC5 223 aa11.24□□□□□ -0.61
MSH5-208ENST00000429846 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms