RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ZNF157P51786 506 aaPredicted RBP4.31□□□□□ -1.72
RIF1-203ENST00000428287 CLDN18P56856 261 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 DEFB110Q30KQ9 67 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 MYPOPQ86VE0 399 aaPredicted RBP4.31□□□□□ -1.72
RIF1-203ENST00000428287 TNFRSF14Q92956 283 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 TMEM147Q9BVK8 224 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 ULBP2Q9BZM5 246 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 TECRQ9NZ01 308 aaKnown RBP4.31□□□□□ -1.72
RIF1-203ENST00000428287 COPS7AQ9UBW8 275 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 CDIPTO14735 213 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 PLCXD2Q0VAA5 305 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 PSG3Q16557 428 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 Q6ZN92 141 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SLC22A18ASQ8N1D0 253 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 FGFRL1Q8N441 504 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 ZNF611Q8N823 705 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 TXN2Q99757 166 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 PRDM14Q9GZV8 571 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 MRPL18Q9H0U6 180 aaKnown RBP4.31□□□□□ -1.72
RIF1-203ENST00000428287 V9GYV3 84 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 RNF212BA8MTL3 300 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 F5H5K5 113 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SH2D1BO14796 132 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 TAX1BP3O14907 124 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 KRTCAP3Q53RY4 240 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SLC25A24Q6NUK1 477 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SPATA12Q7Z6I5 190 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SPACA3Q8IXA5 215 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SCCPDHQ8NBX0 429 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 NECAP1Q8NC96 275 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 OR4F5Q8NH21 305 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 CPT1CQ8TCG5 803 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 DPF1Q92782 380 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 IGHV5-51A0A0C4DH38 117 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 LRRC30A6NM36 301 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 FNDC10F2Z333 226 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 CDAP32320 146 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 DMRTC1Q5HYR2 192 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 FAM78BQ5VT40 261 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 CPEB2Q7Z5Q1 589 aaKnown RBP4.31□□□□□ -1.72
RIF1-203ENST00000428287 SIGLECL1Q8N7X8 197 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 OR8B3Q8NGG8 313 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 OR10V1Q8NGI7 309 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 OR4S2Q8NH73 311 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 OR8B2Q96RD0 313 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 GPHA2Q96T91 129 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SLC25A22Q9H936 323 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SPTY2D1-AS1A0A0U1RR47 76 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SMIM17P0DL12 118 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 CRYBB3P26998 211 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 CNN3Q15417 329 aaKnown RBP4.31□□□□□ -1.72
RIF1-203ENST00000428287 IZUMO4Q1ZYL8 232 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 C20orf204Q6ZNR8 217 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 ZBTB34Q8NCN2 500 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 NPCDR1Q9BY65 106 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 PLEK2Q9NYT0 353 aa4.31□□□□□ -1.72
RIF1-203ENST00000428287 SHISA8B8ZZ34 492 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 DHHO43323 396 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 SS18L1O75177 396 aaPredicted RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 ZNF83P51522 516 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 SUMO1P63165 101 aaKnown RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 RAET1LQ5VY80 246 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 WDR73Q6P4I2 378 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 FADS6Q8N9I5 356 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 TSACCQ96A04 125 aaPredicted RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 CCL28Q9NRJ3 127 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 FCN1O00602 326 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 NOGQ13253 232 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 ZNF468Q5VIY5 522 aaPredicted RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 CDCP2Q5VXM1 449 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 MRPL54Q6P161 138 aaKnown RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 CLEC2AQ6UVW9 174 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 LINC00596Q86U02 117 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 LRP11Q86VZ4 500 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 ZNF709Q8N972 641 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 DERL1Q9BUN8 251 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 C1QTNF5Q9BXJ0 243 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 PRSS46E5RG02 174 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 PAGE4O60829 102 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 S100GP29377 79 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 HNRNPA3P51991 378 aaKnown RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 RPS18P62269 152 aaKnown RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 SLC38A11Q08AI6 406 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 CLEC12BQ2HXU8 276 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 FFAR4Q5NUL3 377 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 COMMD2Q86X83 199 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 NUDT10Q8NFP7 164 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 OR4C5Q8NGB2 326 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 OR10G7Q8NGN6 311 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 PIGTQ969N2 578 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 ZNF501Q96CX3 271 aaPredicted RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 BSNQ9UPA5 3926 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 ZFHX3Q15911 3703 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 ZNF462Q96JM2 2506 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 ZNF816-ZNF321PA0A0X1KG74 233 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 TMEM267Q0VDI3 215 aaPredicted RBP4.3□□□□□ -1.72
RIF1-203ENST00000428287 SLC35E4Q6ICL7 350 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 PRR22Q8IZ63 422 aa4.3□□□□□ -1.72
RIF1-203ENST00000428287 C18orf32Q8TCD1 76 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms