RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ZNF439Q8NDP4 499 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 SH3BGRL3Q9H299 93 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 CHD9Q3L8U1 2897 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 C20orf202A1L168 122 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 CLEC18AA5D8T8 446 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 IGHMP01871 453 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 RPLP1P05386 114 aaKnown RBP9.02□□□□□ -0.97
TCOF1-204ENST00000427724 F2RP25116 425 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 SPCS3P61009 180 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 TBC1D26Q86UD7 250 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 CLEC18CQ8NCF0 446 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 FLYWCH2Q96CP2 140 aaKnown RBP9.02□□□□□ -0.97
TCOF1-204ENST00000427724 ARV1Q9H2C2 271 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 CCL28Q9NRJ3 127 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 FKBP11Q9NYL4 201 aa9.02□□□□□ -0.97
TCOF1-204ENST00000427724 REV3LO60673 3130 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 NPIPB7O75200 414 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H1BP16401 226 aaKnown RBP9.01□□□□□ -0.97
TCOF1-204ENST00000427724 ATP6V0CP27449 155 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 DSCR9P59020 149 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 FAM3AP98173 230 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 RUNX1Q01196 453 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 ENDOGQ14249 297 aaKnown RBP9.01□□□□□ -0.97
TCOF1-204ENST00000427724 C10orf128Q5T292 105 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 RTN4RL2Q86UN3 420 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 ABHD12Q8N2K0 398 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 LEAP2Q969E1 77 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 TMEM54Q969K7 222 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 ERGIC1Q969X5 290 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 FCGR3AP08637 254 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 WDR25Q64LD2 544 aaPredicted RBP9.01□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF525Q8N782 197 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 CMTM2Q8TAZ6 248 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 NOL4LQ96MY1 436 aaPredicted RBP9.01□□□□□ -0.97
TCOF1-204ENST00000427724 DCAF16Q9NXF7 216 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 A0A0U1RQV5 110 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 DPRXA6NFQ7 191 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 H0YIZ8 118 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 K7N7A8 449 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 DVL1O14640 695 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 FGF16O43320 207 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 MBPP02686 304 aaPredicted RBP9.01□□□□□ -0.97
TCOF1-204ENST00000427724 MELTFP08582 738 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 EWSR1Q01844 656 aaKnown RBP eCLIP9.01□□□□□ -0.97
TCOF1-204ENST00000427724 PHYHD1Q5SRE7 291 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 GFI1BQ5VTD9 330 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 GAPTQ8N292 157 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 C10orf35Q96D05 121 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 OR4C12Q96R67 309 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 CACNG5Q9UF02 275 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 TRAPPC1Q9Y5R8 145 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 PRR14LQ5THK1 2151 aa9.01□□□□□ -0.97
TCOF1-204ENST00000427724 PKD1L2Q7Z442 2459 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 DNAH14Q0VDD8 3507 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 LOC102724200A0A096LPH7 203 aaPredicted RBP9□□□□□ -0.97
TCOF1-204ENST00000427724 LOC390937A0A1W2PQ73 354 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 P2RY1P47900 373 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 DYNLT3P51808 116 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 SPINK9Q5DT21 86 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 OR10P1Q8NGE3 313 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 CORO2AQ92828 525 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF524Q96C55 264 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 NTNG2Q96CW9 530 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 SEBOXQ9HB31 216 aaPredicted RBP9□□□□□ -0.97
TCOF1-204ENST00000427724 CLCF1Q9UBD9 225 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF785A8K8V0 405 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 DEDDO75618 318 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 SNRPCP09234 159 aaKnown RBP9□□□□□ -0.97
TCOF1-204ENST00000427724 OPRK1P41145 380 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF154Q13106 437 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 SLC25A53Q5H9E4 307 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 RNF144BQ7Z419 303 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 WFDC3Q8IUB2 231 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 OR4C5Q8NGB2 326 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 RNF126Q9BV68 326 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF319Q9P2F9 582 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 PRRC2AP48634 2157 aaKnown RBP9□□□□□ -0.97
TCOF1-204ENST00000427724 IGLV3-32A0A0A0MS00 114 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 TRAV40A0A0B4J280 105 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 ODAMA1E959 279 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 CHST1O43916 411 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 OR2H2O95918 312 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 BMI1P35226 326 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 CD81P60033 236 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 SUMO1P63165 101 aaKnown RBP9□□□□□ -0.97
TCOF1-204ENST00000427724 HIST1H3AP68431 136 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 LBHQ53QV2 105 aaPredicted RBP9□□□□□ -0.97
TCOF1-204ENST00000427724 BIVMQ86UB2 503 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 POC1AQ8NBT0 407 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 OR52L2PQ8NGH6 319 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 BORCS7Q96B45 105 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 HSD17B10Q99714 261 aaKnown RBP9□□□□□ -0.97
TCOF1-204ENST00000427724 UBE2G2P60604 165 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 ZNF90Q03938 601 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 TMEM241Q24JQ0 296 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 IGF2-ASQ6U949 168 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 SIGLECL1Q8N7X8 197 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 VSTM2AQ8TAG5 236 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 BPESC1Q9GZL8 116 aa9□□□□□ -0.97
TCOF1-204ENST00000427724 ALPK3Q96L96 1907 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms