RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 LRRC3CA6NJW4 275 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 EPPINO95925 133 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 PRSS8Q16651 343 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 C5orf47Q569G3 176 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 OR51G1Q8NGK1 321 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 KCNK17Q96T54 332 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 HES7Q9BYE0 225 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 PBOV1Q9GZY1 135 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 B9A039 149 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 CD55P08174 381 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 C10orf128Q5T292 105 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 PERPQ96FX8 193 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 UCN2Q96RP3 112 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 TIMM8BQ9Y5J9 83 aaPredicted RBP8.35□□□□□ -1.07
USP54-205ENST00000424265 COL5A1P20908 1838 aaPredicted RBP8.35□□□□□ -1.07
USP54-205ENST00000424265 LOC107986453A0A1B0GWG9 222 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 LRRC30A6NM36 301 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 ETV2O00321 342 aaPredicted RBP8.35□□□□□ -1.07
USP54-205ENST00000424265 LILRA1O75019 489 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 HIST1H1DP16402 221 aaKnown RBP8.35□□□□□ -1.07
USP54-205ENST00000424265 SSTR5P35346 364 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 SSBP2P81877 361 aaPredicted RBP8.35□□□□□ -1.07
USP54-205ENST00000424265 MRGPRGQ86SM5 289 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 C1orf162Q8NEQ5 155 aaPredicted RBP8.35□□□□□ -1.07
USP54-205ENST00000424265 PIGCQ92535 297 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 PLEKHF2Q9H8W4 249 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 ST20Q9HBF5 79 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 POLDIP2Q9Y2S7 368 aa8.35□□□□□ -1.07
USP54-205ENST00000424265 RIF1Q5UIP0 2472 aaKnown RBP8.34□□□□□ -1.07
USP54-205ENST00000424265 TGFAP01135 160 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 ECI1P42126 302 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 ALKBH6Q3KRA9 238 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 MRPL54Q6P161 138 aaKnown RBP8.34□□□□□ -1.07
USP54-205ENST00000424265 KCNG3Q8TAE7 436 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 LHX4Q969G2 390 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 ENY2Q9NPA8 101 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 PSG8Q9UQ74 426 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 MS4A18H0YCH9 400 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 TAX1BP3O14907 124 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 CELA3AP09093 270 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 ADRA2CP18825 462 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 EGR4Q05215 589 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 MS4A18Q3C1V0 323 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 SLC25A47Q6Q0C1 308 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 RAB37Q96AX2 223 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 NAT8BQ9UHF3 227 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 C5orf49A4QMS7 147 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 C16orf97H3BN30 126 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 P2RY10O00398 339 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 SPINK8P0C7L1 97 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 IGLC1P0CG04 106 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 EWSR1Q01844 656 aaKnown RBP eCLIP8.34□□□□□ -1.07
USP54-205ENST00000424265 HOGA1Q86XE5 327 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 SLC7A10Q9NS82 523 aa8.34□□□□□ -1.07
USP54-205ENST00000424265 CCL21O00585 134 aa8.34□□□□□ -1.08
USP54-205ENST00000424265 IGHG3P01860 377 aa8.34□□□□□ -1.08
USP54-205ENST00000424265 ZNF32P17041 273 aa8.34□□□□□ -1.08
USP54-205ENST00000424265 PPOXP50336 477 aa8.34□□□□□ -1.08
USP54-205ENST00000424265 MTCP1P56278 107 aa8.34□□□□□ -1.08
USP54-205ENST00000424265 OR2C3Q8N628 320 aa8.34□□□□□ -1.08
USP54-205ENST00000424265 KCNS1Q96KK3 526 aa8.34□□□□□ -1.08
USP54-205ENST00000424265 OR2D2Q9H210 308 aa8.34□□□□□ -1.08
USP54-205ENST00000424265 OR1A1Q9P1Q5 309 aa8.34□□□□□ -1.08
USP54-205ENST00000424265 A0A096LPE4 126 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 A0A1W2PPZ6 126 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 M0R1B8 84 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 PFN1P07737 140 aaKnown RBP8.33□□□□□ -1.08
USP54-205ENST00000424265 PTGDSP41222 190 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 ATP5J2P56134 94 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 FMODQ06828 376 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 ZNF260Q3ZCT1 412 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 CYP2G1PQ6ZSU1 146 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 RPS4Y2Q8TD47 263 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 TMEM54Q969K7 222 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 GFI1Q99684 422 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 FAM231BA6NCW3 169 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 PPIAL4DF5H284 164 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 THY1P04216 161 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 OR5C1Q8NGR4 320 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 SLC25A40Q8TBP6 338 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 GALMQ96C23 342 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 ERRFI1Q9UJM3 462 aaPredicted RBP8.33□□□□□ -1.08
USP54-205ENST00000424265 FBXL7Q9UJT9 491 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 PIGLQ9Y2B2 252 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 PPIAL4EA0A075B759 164 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 FAM24AA6NFZ4 105 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 J3QR06 171 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 J3QRE1 110 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 K7EP34 96 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 RFPL3SP0C7P2 107 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 PPIAL4FP0DN26 164 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 LHX2P50458 406 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 RFLNBQ8N5W9 214 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 SERTAD4Q9NUC0 356 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 ATP23Q9Y6H3 246 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 NTN1O95631 604 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 IL3RAP26951 378 aa8.33□□□□□ -1.08
USP54-205ENST00000424265 ZNF121P58317 390 aaPredicted RBP8.33□□□□□ -1.08
USP54-205ENST00000424265 TMEM131Q92545 1883 aa8.32□□□□□ -1.08
USP54-205ENST00000424265 CNOT1A5YKK6 2376 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms