RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 CSN2P05814 226 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 DUX4L2P0CJ85 424 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 DUX4L3P0CJ86 424 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 DUX4L4P0CJ87 422 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 DUX4L5P0CJ88 424 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 DUX4L6P0CJ89 424 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 DUX4L7P0CJ90 424 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 PPIAL4FP0DN26 164 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 IL7P13232 177 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 FUT3P21217 361 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 GABRR1P24046 479 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 CD80P33681 288 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 KCNJ3P48549 501 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 CEBPDP49716 269 aaPredicted RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 EFNA4P52798 201 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 SNU13P55769 128 aaKnown RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 GMFBP60983 142 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 PITPNAQ00169 270 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 SSBP1Q04837 148 aaKnown RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 MADCAM1Q13477 382 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 ARL6IP1Q15041 203 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 ZMYND11Q15326 602 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 HFEQ30201 348 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 CDNFQ49AH0 187 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 LINC00242Q5T6M2 205 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 RSBN1Q5VWQ0 802 aaPredicted RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 ZNF880Q6PDB4 577 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 DUX4L9Q6RFH8 374 aaPredicted RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 Q6ZS49 121 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 SNX29P2Q8IUI4 249 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 Q8N402 240 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 ZNF561Q8N587 486 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 CHST4Q8NCG5 386 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 ZNRF1Q8ND25 227 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 C19orf18Q8NEA5 215 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 OR4S1Q8NGB4 309 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 CCL17Q92583 94 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 NRGNQ92686 78 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 BORCS5Q969J3 196 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 COQ2Q96H96 371 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 GAFA1Q96PS6 74 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 CCL19Q99731 98 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 FAAP24Q9BTP7 215 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 DNTTIP1Q9H147 329 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 LIME1Q9H400 295 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 SPACA1Q9HBV2 294 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 TMEM165Q9HC07 324 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 MYOZ1Q9NP98 299 aaPredicted RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 PLEKHJ1Q9NW61 149 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 KAAG1Q9UBP8 84 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 DUX4Q9UBX2 424 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 MTFP1Q9UDX5 166 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 ZNF107Q9UII5 783 aaPredicted RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 AK3Q9UIJ7 227 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 MRPS7Q9Y2R9 242 aaKnown RBP3.22□□□□□ -1.89
CLK1-203ENST00000409769 PPIAL4AQ9Y536 164 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.22□□□□□ -1.894e-7■■■■■ 27
CLK1-203ENST00000409769 CR1P17927 2039 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 TENM4Q6N022 2769 aa3.22□□□□□ -1.89
CLK1-203ENST00000409769 ABCA12Q86UK0 2595 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 FBN2P35556 2912 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 DCHS2Q6V1P9 2916 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 TRAV38-1A0A0B4J264 116 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 ANKRD20A5PA0PJZ0 165 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 A4D1N5 150 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 LYNX1G3V0Z9 82 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 K7N7A8 449 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 SIRPB1O00241 398 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 SH2D1BO14796 132 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 PHOX2AO14813 284 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 DEGS1O15121 323 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 PLA2G10O15496 165 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 PHF1O43189 567 aaPredicted RBP3.21□□□□□ -1.9
CLK1-203ENST00000409769 NDUFA2O43678 99 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 ORC5O43913 435 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 GYPAP02724 150 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 FCGR3AP08637 254 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 CD3GP09693 182 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 LYNX1P0DP58 116 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 ZNF44P15621 663 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 DTYMKP23919 212 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 ERP29P30040 261 aaKnown RBP3.21□□□□□ -1.9
CLK1-203ENST00000409769 PRDX2P32119 198 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 PRSS3P35030 304 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 BTCP35070 178 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 MDH2P40926 338 aaKnown RBP3.21□□□□□ -1.9
CLK1-203ENST00000409769 TMEM33P57088 247 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 GNG2P59768 71 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 MICBQ29980 383 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 TMEM155Q4W5P6 130 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 PYDC2Q56P42 97 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 ATAD3CQ5T2N8 411 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 CD164L2Q6UWJ8 174 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 LYPD2Q6UXB3 125 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 TCF23Q7RTU1 214 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 BPIFB2Q8N4F0 458 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 TMEM229BQ8NBD8 167 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 TYMSOSQ8TAI1 123 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 PLPPR1Q8TBJ4 325 aa3.21□□□□□ -1.9
CLK1-203ENST00000409769 MRPL30Q8TCC3 161 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms