RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 IGHV3-11P01762 117 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 SAA2P0DJI9 122 aaPredicted RBP9.46□□□□□ -0.89
SNX13-202ENST00000409604 MYOD1P15172 320 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 OR10Z1Q8NGY1 313 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 CMTM2Q8TAZ6 248 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 POM121Q96HA1 1249 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 GON7Q9BXV9 100 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 GSX2Q9BZM3 304 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 SLA2Q9H6Q3 261 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 DPM3Q9P2X0 92 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 ANKRD17O75179 2603 aaKnown RBP9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A10PA6NDY2 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A18PA6NE21 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A16PA6NEW6 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A20PA6NIJ5 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A8PA6NJQ4 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A7PA6NKC0 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A22PA8MWA6 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A12PA8MX19 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A5PA8MXJ8 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A23PA8MXZ1 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 ZNF207O43670 478 aaKnown RBP9.46□□□□□ -0.89
SNX13-202ENST00000409604 MBPP02686 304 aaPredicted RBP9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A15PP0C7V4 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A13PP0C7W8 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A14PP0C7W9 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 FAM90A24PP0C7X0 464 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 NPY1RP25929 384 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 CD200P41217 278 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 SURF2Q15527 256 aaPredicted RBP9.46□□□□□ -0.89
SNX13-202ENST00000409604 RSG1Q9BU20 258 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 SEBOXQ9HB31 216 aaPredicted RBP9.46□□□□□ -0.89
SNX13-202ENST00000409604 C1RLQ9NZP8 487 aa9.46□□□□□ -0.89
SNX13-202ENST00000409604 SIGLEC5O15389 551 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 HTN1P15515 57 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 RPL8P62917 257 aaKnown RBP9.46□□□□□ -0.9
SNX13-202ENST00000409604 TVP23CQ96ET8 276 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 P2RX4Q99571 388 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 SOSTQ9BQB4 213 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 WASHC3Q9Y3C0 194 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 A0A0B4J293 547 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 FAM106CPP0CH98 169 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 TMEM42Q69YG0 159 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 OR1L8Q8NGR8 309 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 VSTM2AQ8TAG5 236 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 C17orf50Q8WW18 174 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 ITLN2Q8WWU7 325 aaPredicted RBP9.46□□□□□ -0.9
SNX13-202ENST00000409604 FRZBQ92765 325 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 JPT1Q9UK76 154 aa9.46□□□□□ -0.9
SNX13-202ENST00000409604 C7orf66A4D0T2 115 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 HPRT1P00492 218 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 ACAA1P09110 424 aaPredicted RBP9.45□□□□□ -0.9
SNX13-202ENST00000409604 PRSS54Q6PEW0 395 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 ZNF497Q6ZNH5 498 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 LHFPL4Q7Z7J7 247 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 OR4F5Q8NH21 305 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 OR4F4Q96R69 305 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 A0A1W2PN81 502 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 CHRNA7P36544 502 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 RUSC1-AS1Q66K80 236 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 CCDC144NLQ6NUI1 221 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 OR11H4Q8NGC9 324 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 QTRT1Q9BXR0 403 aaKnown RBP9.45□□□□□ -0.9
SNX13-202ENST00000409604 MED9Q9NWA0 146 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 AURKAIP1Q9NWT8 199 aaPredicted RBP9.45□□□□□ -0.9
SNX13-202ENST00000409604 TEP1Q99973 2627 aaKnown RBP9.45□□□□□ -0.9
SNX13-202ENST00000409604 ZNF785A8K8V0 405 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 MMP23AO75900 390 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 MORN2Q502X0 79 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 BTNL8Q6UX41 500 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 RAB40CQ96S21 281 aa9.45□□□□□ -0.9
SNX13-202ENST00000409604 RTBDNQ9BSG5 229 aaPredicted RBP9.45□□□□□ -0.9
SNX13-202ENST00000409604 TIMM23O14925 209 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 OR10J4P0C629 311 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 ADIRFQ15847 76 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 LGALSLQ3ZCW2 172 aaPredicted RBP9.44□□□□□ -0.9
SNX13-202ENST00000409604 SELENOHQ8IZQ5 122 aaKnown RBP9.44□□□□□ -0.9
SNX13-202ENST00000409604 FAM89BQ8N5H3 189 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 FAM216AQ8WUB2 273 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 IGHV3-66A0A0C4DH42 116 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 SHISA9B4DS77 424 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 WNT2P09544 360 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 EWSR1Q01844 656 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNX13-202ENST00000409604 FXYD3Q14802 87 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 SOHLH1Q5JUK2 328 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 Q96MF0 132 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 FGF23Q9GZV9 251 aaPredicted RBP9.44□□□□□ -0.9
SNX13-202ENST00000409604 PRORYQ9H606 182 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 UNKLQ9H9P5 680 aaKnown RBP9.44□□□□□ -0.9
SNX13-202ENST00000409604 Q5PR19 223 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 ZNF529Q6P280 563 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 MMP26Q9NRE1 261 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 LINC00312Q9Y6C7 94 aa9.44□□□□□ -0.9
SNX13-202ENST00000409604 PPOXP50336 477 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 RAG2P55895 527 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 ZNF146Q15072 292 aa9.43□□□□□ -0.9
SNX13-202ENST00000409604 KLF17Q5JT82 389 aaPredicted RBP9.43□□□□□ -0.9
SNX13-202ENST00000409604 NECAP1Q8NC96 275 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms