RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 PDPNQ86YL7 162 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 FOXRED2Q8IWF2 684 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 DMBX1Q8NFW5 382 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 OR11H6Q8NGC7 330 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 OR8H1Q8NGG4 311 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 OR5AN1Q8NGI8 311 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 STOML3Q8TAV4 291 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 OSR1Q8TAX0 266 aaPredicted RBP7.99□□□□□ -1.13
POLR1A-202ENST00000409024 FAM168AQ92567 244 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 LEAP2Q969E1 77 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 R3HDM4Q96D70 268 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 SMIM8Q96KF7 97 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 FOXC2Q99958 501 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 CACNG5Q9UF02 275 aa7.99□□□□□ -1.13
POLR1A-202ENST00000409024 C22orf46C9J442 243 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 SYNGR2O43760 224 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 NDUFS7O75251 213 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 KRASP01116 189 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 GAPDHP04406 335 aaKnown RBP7.98□□□□□ -1.13
POLR1A-202ENST00000409024 G6PCP35575 357 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 LMO4P61968 165 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 ZNF816Q0VGE8 651 aaPredicted RBP7.98□□□□□ -1.13
POLR1A-202ENST00000409024 CXorf66Q5JRM2 361 aaPredicted RBP7.98□□□□□ -1.13
POLR1A-202ENST00000409024 Q6ZRM9 215 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 ZNF429Q86V71 674 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 OR2C3Q8N628 320 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 ZNF525Q8N782 197 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 ZNF383Q8NA42 475 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 ZNF680Q8NEM1 530 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 OR4A5Q8NH83 315 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 C10orf105Q8TEF2 133 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 CIB3Q96Q77 187 aaPredicted RBP7.98□□□□□ -1.13
POLR1A-202ENST00000409024 RNF5Q99942 180 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 SLC35D1Q9NTN3 355 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 LYRM2Q9NU23 88 aaPredicted RBP7.98□□□□□ -1.13
POLR1A-202ENST00000409024 FKBP11Q9NYL4 201 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 HSPB7Q9UBY9 170 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 UBQLN2Q9UHD9 624 aa7.98□□□□□ -1.13
POLR1A-202ENST00000409024 RCL1Q9Y2P8 373 aaKnown RBP7.98□□□□□ -1.13
POLR1A-202ENST00000409024 A0A0G2JRQ6 117 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 A0A1W2PPE3 182 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 OOSP1A8MZH6 123 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 BUB1B-PAK6H3BSN5 160 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 CHST1O43916 411 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 TSC22D2O75157 780 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 JTBO76095 146 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 IGHV3-7P01780 117 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 IL6RP08887 468 aaPredicted RBP7.97□□□□□ -1.13
POLR1A-202ENST00000409024 TPT1P13693 172 aaKnown RBP7.97□□□□□ -1.13
POLR1A-202ENST00000409024 EPHA1P21709 976 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 CEACAM3P40198 252 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 LGALS7P47929 136 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 ATP5J2P56134 94 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 POLR2GP62487 172 aaKnown RBP eCLIP7.97□□□□□ -1.13
POLR1A-202ENST00000409024 PAX2Q02962 417 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 TNFRSF9Q07011 255 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 TMEM177Q53S58 311 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 MINOS1Q5TGZ0 78 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 EIF5AL1Q6IS14 154 aaKnown RBP7.97□□□□□ -1.13
POLR1A-202ENST00000409024 TGIF2LXQ8IUE1 241 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 LRRC75A-AS1Q8N1F1 130 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 OR4C13Q8NGP0 309 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 CLDND2Q8NHS1 167 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 VSTM2AQ8TAG5 236 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 NABP2Q9BQ15 211 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 BPESC1Q9GZL8 116 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 ZC4H2Q9NQZ6 224 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 BEX4Q9NWD9 120 aaPredicted RBP7.97□□□□□ -1.13
POLR1A-202ENST00000409024 BET1LQ9NYM9 111 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 ONECUT1Q9UBC0 465 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 WASHC3Q9Y3C0 194 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 MINOS1-NBL1R4GNA1 71 aa7.97□□□□□ -1.13
POLR1A-202ENST00000409024 BORCS7-ASMTA0A0B4J1R7 106 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 IGHV2-70DA0A0C4DH43 119 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 LEUTXA8MZ59 168 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 H0YJW9 148 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 LY6LH3BQJ8 138 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 CRYZL1O95825 349 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 SLC25A16P16260 332 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 ATP5IP56385 69 aaPredicted RBP7.96□□□□□ -1.14
POLR1A-202ENST00000409024 SPCS3P61009 180 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 UBE2KP61086 200 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 RPP30P78346 268 aaKnown RBP7.96□□□□□ -1.14
POLR1A-202ENST00000409024 OR2B11Q5JQS5 317 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 UTF1Q5T230 341 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 C1orf229Q6ZS94 237 aaPredicted RBP7.96□□□□□ -1.14
POLR1A-202ENST00000409024 PRIMA1Q86XR5 153 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 PUSL1Q8N0Z8 303 aaKnown RBP7.96□□□□□ -1.14
POLR1A-202ENST00000409024 OR8H3Q8N146 312 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 Q8N7P7 452 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 OR4A16Q8NH70 328 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 LRRC20Q8TCA0 184 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 SCARB1Q8WTV0 552 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 LHX4Q969G2 390 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 FLYWCH2Q96CP2 140 aaKnown RBP7.96□□□□□ -1.14
POLR1A-202ENST00000409024 RHOVQ96L33 236 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 PRNDQ9UKY0 176 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 FOXA2Q9Y261 457 aaPredicted RBP7.96□□□□□ -1.14
POLR1A-202ENST00000409024 ZNF257Q9Y2Q1 563 aa7.96□□□□□ -1.14
POLR1A-202ENST00000409024 FBN1P35555 2871 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms