RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ZNF181Q2M3W8 571 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 C1orf194Q5T5A4 169 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 RASSF6Q6ZTQ3 369 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 ACBD7Q8N6N7 88 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 SLC25A29Q8N8R3 303 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 Q8N9L7 120 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR52L1Q8NGH7 329 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR9I1Q8NGQ6 314 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR2T4Q8NH00 348 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 ZNRF2Q8NHG8 242 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 BLNKQ8WV28 456 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 CANT1Q8WVQ1 401 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 ROPN1LQ96C74 230 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 DIRAS2Q96HU8 199 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 SMIM8Q96KF7 97 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 TEX37Q96LM6 180 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 OR52B2Q96RD2 323 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 TRIB3Q96RU7 358 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 CDX2Q99626 313 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 EBPLQ9BY08 206 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 NKX6-2Q9C056 277 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 CACYBPQ9HB71 228 aaKnown RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 CA10Q9NS85 328 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 YTHDF2Q9Y5A9 579 aaKnown RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 KIF21AQ7Z4S6 1674 aa3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 EIF4G3O43432 1585 aaKnown RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 TOP2AP11388 1531 aaKnown RBP3.03□□□□□ -1.92
HMGB1P13-201ENST00000406019 IGHV3-49A0A0A0MS15 119 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 FAM236DA0A1B0GTK5 79 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 A0A1B0GW64 132 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 TMEM72A0PK05 275 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 ARL5CA6NH57 179 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 COPEO14579 308 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 FABP7O15540 132 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 ADRA2AP08913 450 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR4Q2P0C623 313 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 LINC00869P0C866 280 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 SULT1A3P0DMM9 295 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 SULT1A4P0DMN0 295 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 FAM236CP0DP71 79 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 TSPOP30536 169 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 SRIP30626 198 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 BRS3P32247 399 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 GABRA2P47869 451 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 SLC18A1P54219 525 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 PIGPP57054 158 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 RAB5BP61020 215 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 PAFAH1B3Q15102 231 aaKnown RBP3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 HIST3H3Q16695 136 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 CLLU1OSQ5K130 101 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 TOMM20LQ6UXN7 152 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 FAM183BPQ6ZVS7 135 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 FAM231DQ6ZW35 169 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 FA2HQ7L5A8 372 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 SLC35E3Q7Z769 313 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 PRNTQ86SH4 94 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 H1FOOQ8IZA3 346 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 C8orf59Q8N0T1 100 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF439Q8NDP4 499 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 ASB13Q8WXK3 278 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 SLC25A46Q96AG3 418 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 CMBLQ96DG6 245 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 RBMXL1Q96E39 390 aaKnown RBP3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 PGLYRP3Q96LB9 341 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 TP53RKQ96S44 253 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 ADAT1Q9BUB4 502 aaKnown RBP3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 SMIM3Q9BZL3 60 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 FBXL15Q9H469 300 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 POPDC3Q9HBV1 291 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 KLF13Q9Y2Y9 288 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 HDGFL3Q9Y3E1 203 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 HECW2Q9P2P5 1572 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 BCORL1Q5H9F3 1711 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 SSH2Q76I76 1423 aa3.02□□□□□ -1.93
HMGB1P13-201ENST00000406019 SVILO95425 2214 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 RTL1A6NKG5 1358 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 TONSLQ96HA7 1378 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 LOC102725191A0A1B0GVB3 256 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 RBFOX3A6NFN3 312 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 J3QRK9 145 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 DHRS3O75911 302 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF682O95780 498 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 ARPP19P56211 112 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 CMC4P56277 68 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 TAS2R30P59541 319 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 DEFA1P59665 94 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 GNG5P63218 68 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 FABP9Q0Z7S8 132 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 ZNF404Q494X3 552 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 Q499Y3 187 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 CLLU1Q5K131 121 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 PRSS54Q6PEW0 395 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 PDZD9Q8IXQ8 264 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 OR8I2Q8N0Y5 310 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 MMGT1Q8N4V1 131 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 CCL17Q92583 94 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 ARL11Q969Q4 196 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 DDIT4LQ96D03 193 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 RNF5Q99942 180 aa3.01□□□□□ -1.93
HMGB1P13-201ENST00000406019 TBL1YQ9BQ87 522 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms