RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 MRPL20Q9BYC9 149 aaKnown RBP17.07■□□□□ 0.32
TPM1-208ENST00000404484 UNKLQ9H9P5 680 aaKnown RBP17.07■□□□□ 0.32
TPM1-208ENST00000404484 POLR3KQ9Y2Y1 108 aaPredicted RBP17.07■□□□□ 0.32
TPM1-208ENST00000404484 TSC22D2O75157 780 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 CRYZL1O95825 349 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 LY6G6DO95868 133 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 HRASP01112 189 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 COX7A1P24310 79 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 AP2S1P53680 142 aaPredicted RBP17.06■□□□□ 0.32
TPM1-208ENST00000404484 Q71RC1 249 aaPredicted RBP17.06■□□□□ 0.32
TPM1-208ENST00000404484 DMBX1Q8NFW5 382 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 OR11H6Q8NGC7 330 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.06■□□□□ 0.32
TPM1-208ENST00000404484 CACFD1Q9UGQ2 172 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 RCL1Q9Y2P8 373 aaKnown RBP17.06■□□□□ 0.32
TPM1-208ENST00000404484 A0A096LNT2 108 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 KANTRA0A1W2PQU2 76 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 SLC25A16P16260 332 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 RAB13P51153 203 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 PAX2Q02962 417 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 CXorf66Q5JRM2 361 aaPredicted RBP17.06■□□□□ 0.32
TPM1-208ENST00000404484 CLEC9AQ6UXN8 241 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 PNKDQ8N490 385 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 OR5AN1Q8NGI8 311 aa17.06■□□□□ 0.32
TPM1-208ENST00000404484 C2CD3Q4AC94 2353 aa17.05■□□□□ 0.32
TPM1-208ENST00000404484 BUB1B-PAK6H3BSN5 160 aa17.05■□□□□ 0.32
TPM1-208ENST00000404484 P2RY1P47900 373 aa17.05■□□□□ 0.32
TPM1-208ENST00000404484 VAMP2P63027 116 aa17.05■□□□□ 0.32
TPM1-208ENST00000404484 Q6ZRM9 215 aa17.05■□□□□ 0.32
TPM1-208ENST00000404484 NABP2Q9BQ15 211 aa17.05■□□□□ 0.32
TPM1-208ENST00000404484 CR1P17927 2039 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 HIVEP2P31629 2446 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 IGHV4-61A0A0C4DH41 118 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 H0YJW9 148 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 RGS13O14921 159 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 MED6O75586 246 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 MC5RP33032 325 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 POLR2GP62487 172 aaKnown RBP eCLIP17.04■□□□□ 0.32
TPM1-208ENST00000404484 IFITM2Q01629 132 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 POU2AF1Q16633 256 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 GPR157Q5UAW9 335 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 PDPNQ86YL7 162 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 OSR1Q8TAX0 266 aaPredicted RBP17.04■□□□□ 0.32
TPM1-208ENST00000404484 RAB40CQ96S21 281 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 ZC4H2Q9NQZ6 224 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 SIRT7Q9NRC8 400 aa17.04■□□□□ 0.32
TPM1-208ENST00000404484 SONP18583 2426 aaKnown RBP17.03■□□□□ 0.32
TPM1-208ENST00000404484 BCL2L11O43521 198 aa17.03■□□□□ 0.32
TPM1-208ENST00000404484 GAPDHP04406 335 aaKnown RBP17.03■□□□□ 0.32
TPM1-208ENST00000404484 CEACAM3P40198 252 aa17.03■□□□□ 0.32
TPM1-208ENST00000404484 IZUMO4Q1ZYL8 232 aa17.03■□□□□ 0.32
TPM1-208ENST00000404484 MIDNQ504T8 468 aa17.03■□□□□ 0.32
TPM1-208ENST00000404484 OR4P4Q8NGL7 312 aa17.03■□□□□ 0.32
TPM1-208ENST00000404484 WASHC3Q9Y3C0 194 aa17.03■□□□□ 0.32
TPM1-208ENST00000404484 H7C2Y5 167 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 SSSCA1O60232 199 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 GPR137BO60478 399 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 ARG1P05089 322 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 RPL12P30050 165 aaKnown RBP17.02■□□□□ 0.32
TPM1-208ENST00000404484 REG1BP48304 166 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 VMO1Q7Z5L0 202 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 SLC51BQ86UW2 128 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 RPEQ96AT9 228 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 ARPC5LQ9BPX5 153 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 SIRPDQ9H106 197 aa17.02■□□□□ 0.32
TPM1-208ENST00000404484 NSD1Q96L73 2696 aaPredicted RBP17.02■□□□□ 0.32
TPM1-208ENST00000404484 FN1P02751 2386 aaKnown RBP17.02■□□□□ 0.31
TPM1-208ENST00000404484 LEUTXA8MZ59 168 aa17.02■□□□□ 0.31
TPM1-208ENST00000404484 RBMXL2O75526 392 aaKnown RBP17.02■□□□□ 0.31
TPM1-208ENST00000404484 HTR1DP28221 377 aa17.02■□□□□ 0.31
TPM1-208ENST00000404484 DVL1P1P54792 670 aaPredicted RBP17.02■□□□□ 0.31
TPM1-208ENST00000404484 KRTAP1-1Q07627 177 aa17.02■□□□□ 0.31
TPM1-208ENST00000404484 LOXL1Q08397 574 aaPredicted RBP17.02■□□□□ 0.31
TPM1-208ENST00000404484 OR4C13Q8NGP0 309 aa17.02■□□□□ 0.31
TPM1-208ENST00000404484 RHOVQ96L33 236 aa17.02■□□□□ 0.31
TPM1-208ENST00000404484 MAGT1Q9H0U3 335 aa17.02■□□□□ 0.31
TPM1-208ENST00000404484 TMEM140Q9NV12 185 aa17.02■□□□□ 0.31
TPM1-208ENST00000404484 HSPB7Q9UBY9 170 aa17.02■□□□□ 0.31
TPM1-208ENST00000404484 SYNGR2O43760 224 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 HKR1P10072 659 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 DLX1P56177 255 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 TNFRSF9Q07011 255 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 TMEM177Q53S58 311 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 ZNF767PQ75MW2 155 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 OR4A16Q8NH70 328 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 LHX4Q969G2 390 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 FLYWCH2Q96CP2 140 aaKnown RBP17.01■□□□□ 0.31
TPM1-208ENST00000404484 SLC25A31Q9H0C2 315 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 C11orf1Q9H5F2 150 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 DPM3Q9P2X0 92 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 INSIG2Q9Y5U4 225 aa17.01■□□□□ 0.31
TPM1-208ENST00000404484 NF1P21359 2839 aa17■□□□□ 0.31
TPM1-208ENST00000404484 MSGN1A6NI15 193 aa17■□□□□ 0.31
TPM1-208ENST00000404484 ODF3BA8MYP8 253 aa17■□□□□ 0.31
TPM1-208ENST00000404484 TAAR5O14804 337 aa17■□□□□ 0.31
TPM1-208ENST00000404484 SHOXO15266 292 aa17■□□□□ 0.31
TPM1-208ENST00000404484 CHST1O43916 411 aa17■□□□□ 0.31
TPM1-208ENST00000404484 TOX4O94842 621 aa17■□□□□ 0.31
TPM1-208ENST00000404484 LY86O95711 162 aa17■□□□□ 0.31
TPM1-208ENST00000404484 USF1P22415 310 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms