RNA–Protein interactions for RNA: ENST00000404038.5

EFCAB6-204, Transcript of EF-hand calcium binding domain 6, human

TSL 2

Gene EFCAB6, Length 1,648 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB6-204	ENST00000404038	RAB39B	Q96DA2	213 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	QTRT1	Q9BXR0	403 aa	Known RBP	13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038		A0A1B0GW64	132 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SIAH2	O43255	324 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SPCS3	P61009	180 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TLE4	Q04727	773 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	HFE	Q30201	348 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TMEM200B	Q69YZ2	307 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	OR8G2P	Q6IF36	304 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	LYPD2	Q6UXB3	125 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	ZDHHC16	Q969W1	377 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	PINX1	Q96BK5	328 aa	Known RBP	13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	WDR61	Q9GZS3	305 aa	Known RBP	13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	HIPK2	Q9H2X6	1198 aa		13.64	□□□□□ -0.23
EFCAB6-204	ENST00000404038	FAM157A	C9JC47	383 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	FCN3	O75636	299 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SNAPIN	O95295	136 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	H2AFB1	P0C5Y9	115 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SERF2	P84101	59 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SSX9	Q7RTT3	188 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	H1FX	Q92522	213 aa	Known RBP	13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	CLCC1	Q96S66	551 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TMEM204	Q9BSN7	226 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TMEM147	Q9BVK8	224 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SCRT1	Q9BWW7	348 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TMEM140	Q9NV12	185 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	CTSZ	Q9UBR2	303 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	FBXO7	Q9Y3I1	522 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TIMM9	Q9Y5J7	89 aa		13.63	□□□□□ -0.23
EFCAB6-204	ENST00000404038	ZFYVE26	Q68DK2	2539 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	PMS2P5	A8MQ11	134 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	DVL1	O14640	695 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	FSTL3	O95633	263 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	IFNA17	P01571	189 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	HBE1	P02100	147 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	LOX	P28300	417 aa	Predicted RBP	13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	PPOX	P50336	477 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	OR2B8P	P59922	312 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	RAB2A	P61019	212 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	RPP30	P78346	268 aa	Known RBP	13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	RELB	Q01201	579 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	GUCA2B	Q16661	112 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	ZNF383	Q8NA42	475 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	OR10P1	Q8NGE3	313 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	EIF5A2	Q9GZV4	153 aa	Known RBP	13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SMDT1	Q9H4I9	107 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	KPTN	Q9Y664	436 aa		13.62	□□□□□ -0.23
EFCAB6-204	ENST00000404038	UBE2L5P	A0A1B0GUS4	154 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	HRAS	P01112	189 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	CCL3L1	P16619	93 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	GNB2	P62879	340 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	POU2AF1	Q16633	256 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SPSB3	Q6PJ21	355 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	ZNF833P	Q6ZTB9	187 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	ZNF429	Q86V71	674 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	PUSL1	Q8N0Z8	303 aa	Known RBP	13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	C8orf31	Q8N9H6	132 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TAF15	Q92804	592 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	RSG1	Q9BU20	258 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	RTL8B	Q17RB0	113 aa		13.61	□□□□□ -0.23
EFCAB6-204	ENST00000404038	RELN	P78509	3460 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	C15orf61	A6NNL5	157 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038		C9JQL5	133 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	DNASE2	O00115	360 aa	Predicted RBP	13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	ARG1	P05089	322 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	IGFBP2	P18065	325 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	VWC2	Q2TAL6	325 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SPINK9	Q5DT21	86 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SP5	Q6BEB4	398 aa	Predicted RBP	13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	FAM71F2	Q6NXP2	309 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	VKORC1L1	Q8N0U8	176 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	RBMXL1	Q96E39	390 aa	Known RBP	13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	AIFM2	Q9BRQ8	373 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	KIAA1456	Q9P272	454 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	ROS1	P08922	2347 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	PKDREJ	Q9NTG1	2253 aa		13.6	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TRBV23-1	A0A0A0MS06	115 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TRAV1-1	A0A0B4J248	108 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	C15orf62	A8K5M9	175 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	GPR37	O15354	613 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	CT45A6	P0DMU7	189 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	CT45A5	P0DMU8	189 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	CT45A7	P0DMV0	189 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	PPT1	P50897	306 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	TAGLN	Q01995	201 aa	Known RBP	13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	OR4A47	Q6IF82	309 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	LINC00311	Q8N616	119 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	ZNF596	Q8TC21	504 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	RHOV	Q96L33	236 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	SLC35D1	Q9NTN3	355 aa		13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	FOXA2	Q9Y261	457 aa	Predicted RBP	13.59	□□□□□ -0.23
EFCAB6-204	ENST00000404038	VDAC2	P45880	294 aa	Predicted RBP	13.58	□□□□□ -0.24
EFCAB6-204	ENST00000404038	DLX6	P56179	175 aa		13.58	□□□□□ -0.24
EFCAB6-204	ENST00000404038	TMEM155	Q4W5P6	130 aa		13.58	□□□□□ -0.24
EFCAB6-204	ENST00000404038	TMEM41B	Q5BJD5	291 aa		13.58	□□□□□ -0.24
EFCAB6-204	ENST00000404038	TCF19	Q9Y242	345 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms