RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 FAM169BQ8N8A8 192 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 FAM216AQ8WUB2 273 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 GUCD1Q96NT3 240 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 MRPL18Q9H0U6 180 aaKnown RBP7.64□□□□□ -1.19
PTPRM-202ENST00000400053 ZNF430Q9H8G1 570 aaPredicted RBP7.64□□□□□ -1.19
PTPRM-202ENST00000400053 GPR35Q9HC97 309 aa7.64□□□□□ -1.19
PTPRM-202ENST00000400053 SOX21Q9Y651 276 aaPredicted RBP7.64□□□□□ -1.19
PTPRM-202ENST00000400053 TRBV9A0A0B4J1U6 114 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A26D6RGX4 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 PF4V1P10720 104 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 HOXB1P14653 301 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-202ENST00000400053 MFAP4P55083 255 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 TMEM136Q6ZRR5 245 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 ZNF714Q96N38 554 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 RBKSQ9H477 322 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 WIPI2Q9Y4P8 454 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 PXMP4Q9Y6I8 212 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 IGLV1-36A0A0B4J1U3 117 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 TMEM250H0YL14 139 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 DLL1O00548 723 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 CTAG1AP78358 180 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 RELQ04864 619 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-202ENST00000400053 ZP4Q12836 540 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 LINC01590Q5TEZ4 76 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 C11orf68Q9H3H3 251 aaKnown RBP7.63□□□□□ -1.19
PTPRM-202ENST00000400053 CARHSP1Q9Y2V2 147 aaKnown RBP7.63□□□□□ -1.19
PTPRM-202ENST00000400053 DOCK4Q8N1I0 1966 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 ANKRD36A6QL64 1941 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 IGHV3-21A0A0B4J1V1 117 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 A0A0G2JK05 382 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A10PA6NDY2 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A18PA6NE21 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A16PA6NEW6 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A20PA6NIJ5 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A8PA6NJQ4 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A7PA6NKC0 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A22PA8MWA6 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A12PA8MX19 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A5PA8MXJ8 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A23PA8MXZ1 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 OR11H12B2RN74 326 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 TSPAN13O95857 204 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 TBX6O95947 436 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A15PP0C7V4 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A13PP0C7W8 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A14PP0C7W9 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 FAM90A24PP0C7X0 464 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 DMRTA1Q5VZB9 504 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 MDP1Q86V88 176 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 POC1AQ8NBT0 407 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 OR11H1Q8NG94 326 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 OR11H2Q8NH07 326 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 GPR146Q96CH1 333 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 CHD5Q8TDI0 1954 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 A0A1B0GV72 72 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 ZIC3O60481 467 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 TSPAN2O60636 221 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 LIPFP07098 398 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 CACNG7P62955 275 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 CT55Q8WUE5 264 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 MBD3L1Q8WWY6 194 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 ZDHHC8Q9ULC8 765 aa7.63□□□□□ -1.19
PTPRM-202ENST00000400053 ZNF729A6NN14 1252 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-202ENST00000400053 LINC00869P0C866 280 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 ANOS1P23352 680 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 TSPAN7P41732 249 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 EFNB1P98172 346 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 UNC119Q13432 240 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 FXYD3Q14802 87 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 LEMD1Q68G75 181 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 TCF23Q7RTU1 214 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 OR10S1Q8NGN2 331 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 NEUROG1Q92886 237 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 FOXJ2Q9P0K8 574 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 CACNA1EQ15878 2313 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 THY1P04216 161 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 NUTF2P61970 127 aaKnown RBP7.62□□□□□ -1.19
PTPRM-202ENST00000400053 PLAURQ03405 335 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 NR2C2APQ86WQ0 139 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 OR13C6PQ8NH95 151 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 EP300Q09472 2414 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-202ENST00000400053 HIKESHIQ53FT3 197 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 C10orf128Q5T292 105 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 MIC13Q5XKP0 118 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 ZNF501Q96CX3 271 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-202ENST00000400053 PARLQ9H300 379 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 WDR54Q9H977 334 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 RNF222A6NCQ9 220 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 H0Y980 276 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 SRIP30626 198 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 GFRA1P56159 465 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 RPL8P62917 257 aaKnown RBP7.62□□□□□ -1.19
PTPRM-202ENST00000400053 CX3CL1P78423 397 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 IGLV3-21P80748 117 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-202ENST00000400053 KRTCAP3Q53RY4 240 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 C1orf210Q8IVY1 113 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 TMEM101Q96IK0 257 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 AICDAQ9GZX7 198 aa7.62□□□□□ -1.19
PTPRM-202ENST00000400053 ZNF71Q9NQZ8 489 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms